|
GeneID |
8545
|
Symbol |
CGGBP1
|
Synonyms |
CGGBP|p20-CGGBP
|
Description |
CGG triplet repeat binding protein 1 |
See related |
HGNC:1888|MIM:603363|Ensembl:ENSG00000163320|HPRD:04529| |
Locus tag |
- |
Gene type |
protein-coding |
Map location |
3p12-p11.1 |
|
|
|
Gene set name |
Method of gene set |
Evidence |
Info |
GSMA_IIE | genome scan meta-analysis (European-ancestry samples) | Psr: 0.04359 | | GSMA_IIA | genome scan meta-analysis (All samples) | Psr: 0.04047 | |
|
|
General Gene Expression (microarray) ? |
|
|
|
Gene Expression in Brain Regions (new) |
|
|
Top co-expressed genes in Brain Regions (new) |
|
Gene | Pearson's Correlation | Spearman's Correlation | | |
Top 10 positively co-expressed genes |
KLK6 | 0.94 | 0.90 | | |
DBNDD2 | 0.94 | 0.91 | | |
GJB1 | 0.93 | 0.89 | | |
MAG | 0.93 | 0.89 | | |
TF | 0.92 | 0.91 | | |
TSPAN15 | 0.92 | 0.88 | | |
PLA2G16 | 0.92 | 0.92 | | |
NINJ2 | 0.91 | 0.89 | | |
CAPN3 | 0.91 | 0.85 | | |
CNP | 0.91 | 0.83 | | |
Top 10 negatively co-expressed genes | NKIRAS2 | -0.57 | -0.67 | | |
KIAA1949 | -0.57 | -0.70 | | |
ZBTB8A | -0.56 | -0.69 | | |
TUBB2B | -0.56 | -0.74 | | |
ZNF551 | -0.55 | -0.68 | | |
AC004017.1 | -0.55 | -0.67 | | |
ZNF300 | -0.55 | -0.69 | | |
CRMP1 | -0.54 | -0.64 | | |
PCDHB18 | -0.54 | -0.65 | | |
ZNF821 | -0.54 | -0.65 | | |
|
Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
---|
GO:0003677 | DNA binding | IEA | | - |
GO:0003690 | double-stranded DNA binding | TAS | | 8626781 |
Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
---|
GO:0006355 | regulation of transcription, DNA-dependent | IEA | | - |
GO:0006350 | transcription | IEA | | - |
Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
---|
GO:0005634 | nucleus | TAS | | 8626781 |
|
|
|
- SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
- Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.
|