Gene Page: CGGBP1

Summary
GeneID  8545
Symbol  CGGBP1
Synonyms  CGGBP|p20-CGGBP
Description  CGG triplet repeat binding protein 1
See related  HGNC:1888|MIM:603363|Ensembl:ENSG00000163320|HPRD:04529|
Locus tag  -
Gene type  protein-coding
Map location  3p12-p11.1
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_IIEgenome scan meta-analysis (European-ancestry samples)Psr: 0.04359 
GSMA_IIAgenome scan meta-analysis (All samples)Psr: 0.04047 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
KLK60.940.90
DBNDD20.940.91
GJB10.930.89
MAG0.930.89
TF0.920.91
TSPAN150.920.88
PLA2G160.920.92
NINJ20.910.89
CAPN30.910.85
CNP0.910.83
Top 10 negatively co-expressed genes
NKIRAS2-0.57-0.67
KIAA1949-0.57-0.70
ZBTB8A-0.56-0.69
TUBB2B-0.56-0.74
ZNF551-0.55-0.68
AC004017.1-0.55-0.67
ZNF300-0.55-0.69
CRMP1-0.54-0.64
PCDHB18-0.54-0.65
ZNF821-0.54-0.65
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0003677DNA bindingIEA-
GO:0003690double-stranded DNA bindingTAS8626781 
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0006355regulation of transcription, DNA-dependentIEA-
GO:0006350transcriptionIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005634nucleusTAS8626781 
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-138166716731Ahsa-miR-138brainAGCUGGUGUUGUGAAUC
miR-148/152319732031Ahsa-miR-148aUCAGUGCACUACAGAACUUUGU
hsa-miR-152brainUCAGUGCAUGACAGAACUUGGG
hsa-miR-148bUCAGUGCAUCACAGAACUUUGU
miR-18309931051Ahsa-miR-18aUAAGGUGCAUCUAGUGCAGAUA
hsa-miR-18bUAAGGUGCAUCUAGUGCAGUUA
miR-18129642970m8hsa-miR-181abrainAACAUUCAACGCUGUCGGUGAGU
hsa-miR-181bSZAACAUUCAUUGCUGUCGGUGGG
hsa-miR-181cbrainAACAUUCAACCUGUCGGUGAGU
hsa-miR-181dbrainAACAUUCAUUGUUGUCGGUGGGUU
miR-200bc/42939451Ahsa-miR-200bUAAUACUGCCUGGUAAUGAUGAC
hsa-miR-200cUAAUACUGCCGGGUAAUGAUGG
hsa-miR-429UAAUACUGUCUGGUAAAACCGU
miR-22413441350m8hsa-miR-224CAAGUCACUAGUGGUUCCGUUUA
miR-320125412601Ahsa-miR-320AAAAGCUGGGUUGAGAGGGCGAA
miR-324-3p6846901Ahsa-miR-324-3pCCACUGCCCCAGGUGCUGCUGG
miR-38133063312m8hsa-miR-381UAUACAAGGGCAAGCUCUCUGU
miR-494247424811A,m8hsa-miR-494brainUGAAACAUACACGGGAAACCUCUU
miR-5055359m8hsa-miR-505GUCAACACUUGCUGGUUUCCUC
miR-543296529721A,m8hsa-miR-543AAACAUUCGCGGUGCACUUCU
miR-7254125481A,m8hsa-miR-7SZUGGAAGACUAGUGAUUUUGUUG
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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