Gene Page

Gene Page: ANKRD13A

Summary

GeneID

88455

Symbol

ANKRD13A

Synonyms

ANKRD13|NY-REN-25

Description

ankyrin repeat domain 13A

Locus tag

Gene type

protein-coding

Map location

12q24.11

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

P value: 1.593

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_DN	537	339	All SZGR genes in this pathway
RICKMAN_TUMOR_DIFFERENTIATED_WELL_VS_POORLY_DN	382	224	All SZGR genes in this pathway
PASQUALUCCI_LYMPHOMA_BY_GC_STAGE_DN	165	104	All SZGR genes in this pathway
GEORGES_TARGETS_OF_MIR192_AND_MIR215	893	528	All SZGR genes in this pathway
MONNIER_POSTRADIATION_TUMOR_ESCAPE_UP	393	244	All SZGR genes in this pathway
WANG_TUMOR_INVASIVENESS_DN	210	128	All SZGR genes in this pathway
CHICAS_RB1_TARGETS_GROWING	243	155	All SZGR genes in this pathway
CHICAS_RB1_TARGETS_CONFLUENT	567	365	All SZGR genes in this pathway
PILON_KLF1_TARGETS_DN	1972	1213	All SZGR genes in this pathway
FORTSCHEGGER_PHF8_TARGETS_DN	784	464	All SZGR genes in this pathway
FOSTER_KDM1A_TARGETS_DN	211	119	All SZGR genes in this pathway
ZWANG_CLASS_1_TRANSIENTLY_INDUCED_BY_EGF	516	308	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-124.1	665	671	1A	hsa-miR-124a	UUAAGGCACGCGGUGAAUGCCA
miR-124.1	665	671	1A	hsa-miR-124a	UUAAGGCACGCGGUGAAUGCCA
miR-124/506	658	664	1A	hsa-miR-506	UAAGGCACCCUUCUGAGUAGA
miR-124/506	658	664	1A	hsa-miR-124^brain	UAAGGCACGCGGUGAAUGCC
miR-137	1144	1150	1A	hsa-miR-137	UAUUGCUUAAGAAUACGCGUAG
miR-204/211	1023	1030	1A,m8	hsa-miR-204^brain	UUCCCUUUGUCAUCCUAUGCCU
				hsa-miR-211	UUCCCUUUGUCAUCCUUCGCCU
				hsa-miR-204^brain	UUCCCUUUGUCAUCCUAUGCCU
				hsa-miR-211	UUCCCUUUGUCAUCCUUCGCCU
miR-22	802	808	1A	hsa-miR-22^brain	AAGCUGCCAGUUGAAGAACUGU
miR-22	802	808	1A	hsa-miR-22^brain	AAGCUGCCAGUUGAAGAACUGU
miR-320	289	296	1A,m8	hsa-miR-320	AAAAGCUGGGUUGAGAGGGCGAA
miR-500	137	143	m8	hsa-miR-500	AUGCACCUGGGCAAGGAUUCUG
miR-539	1175	1181	1A	hsa-miR-539	GGAGAAAUUAUCCUUGGUGUGU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.