|
GeneID |
9751
|
Symbol |
SNPH
|
Synonyms |
KIAA0374|MGC46096|bA314N13.5
|
Description |
syntaphilin |
See related |
HGNC:15931|MIM:604942|Ensembl:ENSG00000101298|HPRD:16081| |
Locus tag |
- |
Gene type |
protein-coding |
Map location |
20p13 |
|
|
|
Gene set name |
Method of gene set |
Evidence |
Info |
GO_Annotation | Mapping neuro-related keywords to Gene Ontology annotations | Hits with neuro-related keywords: 3 | |
|
|
General Gene Expression (microarray) ? |
|
|
|
Gene Expression in Brain Regions (new) |
|
|
Top co-expressed genes in Brain Regions (new) |
|
Gene | Pearson's Correlation | Spearman's Correlation | | |
Top 10 positively co-expressed genes |
AGPAT3 | 0.92 | 0.93 | | |
NFE2L1 | 0.91 | 0.92 | | |
SIDT2 | 0.89 | 0.89 | | |
SPATA2 | 0.89 | 0.89 | | |
TBC1D9B | 0.89 | 0.90 | | |
AP006216.1 | 0.88 | 0.93 | | |
TOM1L2 | 0.88 | 0.88 | | |
ATG9A | 0.88 | 0.88 | | |
ZBTB4 | 0.87 | 0.91 | | |
AMIGO1 | 0.87 | 0.87 | | |
Top 10 negatively co-expressed genes | C8orf59 | -0.56 | -0.54 | | |
GNG11 | -0.55 | -0.51 | | |
AL050337.1 | -0.54 | -0.53 | | |
ST20 | -0.54 | -0.57 | | |
PFDN5 | -0.54 | -0.52 | | |
SYCP3 | -0.53 | -0.51 | | |
C1orf54 | -0.53 | -0.45 | | |
RPL31 | -0.52 | -0.57 | | |
RPL35 | -0.51 | -0.56 | | |
C1orf61 | -0.51 | -0.46 | | |
|
Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
---|
GO:0017075 | syntaxin-1 binding | NAS | | 10707983 |
Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
---|
GO:0007269 | neurotransmitter secretion | NAS | neuron, axon, Synap, serotonin, Neurotransmitter, dopamine (GO term level: 8) | 10707983 |
GO:0016081 | synaptic vesicle docking during exocytosis | NAS | Synap (GO term level: 10) | 10707983 |
Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
---|
GO:0019717 | synaptosome | IEA | Synap, Brain (GO term level: 7) | - |
GO:0045202 | synapse | IEA | neuron, Synap, Neurotransmitter, Glial (GO term level: 2) | - |
GO:0016020 | membrane | IEA | | - |
GO:0016021 | integral to membrane | IEA | | - |
GO:0030054 | cell junction | IEA | | - |
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- SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
- Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.
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