| General information | Literature | Expression | Regulation | Variant | Interaction |
|
Basic Information |
|
|---|---|
Gene ID | 10664 |
Name | CTCF |
Synonym | MRD21;CCCTC-binding factor (zinc finger protein);CTCF;CCCTC-binding factor (zinc finger protein) |
Definition | 11 zinc finger transcriptional repressor|11-zinc finger protein|CTCFL paralog|transcriptional repressor CTCF |
Position | 16q21-q22.3 |
Gene Type | protein-coding |
|
TSG scores |
Description |
| TUSON ranking | 24 |
TUSON P-value | 2.84E-23 |
|
Pathways and Diseases |
|
Pathway | ctcf: first multivalent nuclear factor;PID BioCarta;100194 |
Disease | Nephroblastoma;FunDO |
Disease | Lung cancer;FunDO |
Disease | HDL cholesterol;NHGRI |
Disease | HDL cholesterol;GAD |
Disease | Breast cancer;FunDO |
Disease | METABOLIC;GAD |
|
External Links |
|
Links to Entrez Gene | 10664 |
Links to all GeneRIF Items | 10664 |
Links to iHOP | 10664 |
|
Sequence Information |
The sequences provided here are only the longest representative sequences, not covering all the isoforms. |
Nucleotide Sequence |
>10664 : length: 1200 atggcctttgtgaccagtggagaattggttcggcatcgtcgttacaaacacacccacgag aagccattcaagtgttccatgtgcgattacgccagtgtagaagtcagcaaattaaaacgt cacattcgctctcatactggagagcgtccgtttcagtgcagtttgtgcagttatgccagc agggacacatacaagctgaaaaggcacatgagaacccattcaggggaaaagccttatgaa tgttatatttgtcatgctcggtttacccaaagtggtaccatgaagatgcacattttacag aagcacacagaaaatgtggccaaatttcactgtccccactgtgacacagtcatagcccga aaaagtgatttgggtgtccacttgcgaaagcagcattcctatattgagcaaggcaagaaa tgccgttactgtgatgctgtgtttcatgagcgctatgccctcatccagcatcagaagtca cacaagaatgagaagcgctttaagtgtgaccagtgtgattacgcttgtagacaggagagg cacatgatcatgcacaagcgcacccacaccggggagaagccttacgcctgcagccactgc gataagaccttccgccagaagcagcttctcgacatgcacttcaagcgctatcacgacccc aacttcgtccctgcggcttttgtctgttctaagtgtgggaaaacatttacacgtcggaat accatggcaagacatgctgataattgtgctggcccagatggcgtagagggggaaaatgga ggagaaacgaagaagagtaaacgtggaagaaaaagaaagatgcgctctaagaaagaagat tcctctgacagtgaaaatgctgaaccagatctggacgacaatgaggatgaggaggagcct gccgtagaaattgaacctgagccagagcctcagcctgtgaccccagccccaccacccgcc aagaagcggagaggacgaccccctggcagaaccaaccagcccaaacagaaccagccaaca gctatcattcaggttgaagaccagaatacaggtgcaattgagaacattatagttgaagta aaaaaagagccagatgctgagcccgcagagggagaggaagaggaggcccagccagctgcc acagatgcccccaacggagacctcacgcccgagatgatcctcagcatgatggaccggtga |
Protein Sequence |
>10664 : length: 399 MAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYAS RDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIAR KSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQER HMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN TMARHADNCAGPDGVEGENGGETKKSKRGRKRKMRSKKEDSSDSENAEPDLDDNEDEEEP AVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTNQPKQNQPTAIIQVEDQNTGAIENIIVEV KKEPDAEPAEGEEEEAQPAATDAPNGDLTPEMILSMMDR |