| General information | Literature | Expression | Regulation | Variant | Interaction |
|
Basic Information |
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|---|---|
Gene ID | 11122 |
Name | PTPRT |
Synonym | RPTPrho;protein tyrosine phosphatase, receptor type, T;PTPRT;protein tyrosine phosphatase, receptor type, T |
Definition | R-PTP-T|RPTP-rho|receptor protein tyrosine phosphatase|receptor-type tyrosine-protein phosphatase T|receptor-type tyrosine-protein phosphatase rho |
Position | 20q12-q13 |
Gene Type | protein-coding |
|
TSG scores |
Description |
| TUSON ranking | 13620 |
TUSON P-value | 1 |
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External Links |
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Links to Entrez Gene | 11122 |
Links to all GeneRIF Items | 11122 |
Links to iHOP | 11122 |
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Sequence Information |
The sequences provided here are only the longest representative sequences, not covering all the isoforms. |
Nucleotide Sequence |
>11122 : length: 4326 atggcgagcctcgccgcgctcgccctcagcctgctcctgaggctgcagctgccgccactg cccggcgcccgggctcagagcgccgcaggtggctgttcctttgatgagcactacagcaac tgtggttatagtgtggctctagggaccaatgggttcacctgggagcagattaacacatgg gagaaaccaatgctggaccaggcagtgcccacaggatctttcatgatggtgaacagctct gggagagcctctggccagaaggcccaccttctcctgccaaccctgaaggagaatgacacc cactgcatcgacttccattactacttctccagccgtgacaggtccagcccaggggccttg aacgtctacgtgaaggtgaatggtggcccccaagggaaccctgtgtggaatgtgtccggg gtcgtcactgagggctgggtgaaggcagagctcgccatcagcactttctggccacatttc tatcaggtgatatttgaatccgtctcattgaagggtcatcctggctacatcgccgtggac gaggtccgggtccttgctcatccatgcagaaaagcacctcattttctgcgactccaaaac gtggaggtgaatgtggggcagaatgccacatttcagtgcattgctggtgggaagtggtct cagcatgacaagctttggctccagcaatggaatggcagggacacggccctgatggtcacc cgtgtggtcaaccacaggcgcttctcagccacagtcagtgtggcagacactgcccagcgg agcgtcagcaagtaccgctgtgtgatccgctctgatggtgggtctggtgtgtccaactac gcggagctgatcgtgaaagagcctcccacgcccattgctcccccagagctgctggctgtg ggggccacatacctgtggatcaagccaaatgccaactccatcatcggggatggccccatc atcctgaaggaagtggaatatcgcaccaccacaggcacgtgggcagagacccacatagtc gactctcccaactataagctgtggcatctggaccccgatgttgagtatgagatccgagtg ctcctcacacgaccaggtgaggggggtacgggaccgccagggcctcccctcaccaccagg accaagtgtgcagatccggtacatggcccacagaacgtggaaatcgtagacatcagagcc cggcagctgaccctgcagtgggagcccttcggctacgcggtgacccgctgccatagctac aacctcaccgtgcagtaccagtatgtgttcaaccagcagcagtacgaggccgaggaggtc atccagacctcctcccactacaccctgcgaggcctgcgccccttcatgaccatccggctg cgactcttgctgtctaaccccgagggccgaatggagagcgaggagctggtggtgcagact gaggaagacgttccaggagctgttcctctagaatccatccaaggggggccctttgaggag aagatctacatccagtggaaacctcccaatgagaccaatggggtcatcacgctctacgag atcaactacaaggctgtcggctcgctggacccaagtgctgacctctcgagccagaggggg aaagtgttcaagctccggaatgaaacccaccacctctttgtgggtctgtacccagggacc acctattccttcaccatcaaggccagcacagcaaagggctttgggccccctgtcaccact cggattgccaccaaaatttcagctccatccatgcctgagtacgacacagacaccccattg aatgagacagacacgaccatcacagtgatgctgaaacccgctcagtcccggggagctcct gtcagtgtttatcagctggttgtcaaggaggagcgacttcagaagtcacggagggcagct gacattattgagtgcttttcggtgcccgtgagctatcggaatgcctccagcctcgattct ctacactactttgctgctgagttgaagcctgccaacctgcctgtcacccagccatttaca gtgggtgacaataagacatacaatggctactggaaccctcctctctctcccctgaaaagc tacagcatctacttccaggcactcagcaaagccaatggagagaccaaaatcaactgtgtt cgtctggctacaaaaggtgcctccacccagaattctaacactgtggagccagagaagcag gtggacaacaccgtgaagatggctggcgtgatcgctggcctcctcatgttcatcatcatt ctcctgggcgtgatgctcaccatcaaaaggagaagaaatgcttattcctactcctattac ttgaagctggccaagaagcagaaggagacccagagtggagcccagagggagatggggcct gtggcctctgccgacaaacccaccaccaagctcagcgccagccgcaatgatgaaggcttc tcttctagttctcaggacgtcaacggattcacagatggcagccgcggggagctttcccag cccaccctcacgatccagactcatccctaccgcacctgtgaccctgtggagatgagctac ccccgggaccagttccaacccgccatccgggtggctgacttgctgcagcacatcacgcag atgaagagaggccagggctacgggttcaaggaggaatacgaggccttaccagaggggcag acagcttcgtgggacacagccaaggaggatgaaaaccgcaataagaatcgatatgggaac atcatatcctacgaccattcccgggtgaggctgctggtgctggatggagacccgcactct gactacatcaatgccaactacattgacggataccatcgacctcggcactacattgcgact caaggtccgatgcaggagactgtaaaggacttttggagaatgatctggcaggagaactcc gccagcatcgtcatggtcacaaacctggtggaagtgggcagggtgaaatgtgtgcgatac tggccagatgacacggaggtctacggagacattaaagtcaccctgattgaaacagagccc ctggcagaatacgtcatacgcaccttcacagtccagaagaaaggctaccatgagatccgg gagctccgcctcttccacttcaccagctggcctgaccacggcgttccctgctatgccact ggccttctgggcttcgtccgccaggtcaagttcctcaaccccccggaagctgggcccata gtggtccactgcagtgctggggctgggcggactggctgcttcattgccattgacaccatg cttgacatggccgagaatgaaggggtggtggacatcttcaactgcgtgcgtgagctccgg gcccaaagggtcaacctggtacagacagaggagcaatatgtgtttgtgcacgatgccatc ctggaagcgtgcctctgtggcaacactgccatccctgtgtgtgagttccgttctctctac tacaatatcagcaggctggacccccagacaaactccagccaaatcaaagatgaatttcag accctcaacattgtgacaccccgtgtgcggcccgaggactgcagcattgggctcctgccc cggaaccatgataagaatcgaagtatggacgtgctgcctctggaccgctgcctgcccttc cttatctcagtggacggagaatccagcaattacatcaacgcagcactgatggatagccac aagcagcctgccgccttcgtggtcacccagcaccctctacccaacaccgtggcagacttc tggaggctggtgttcgattacaactgctcctctgtggtgatgctgaatgagatggacact gcccagttctgtatgcagtactggcctgagaagacctccgggtgctatgggcccatccag gtggagttcgtctccgcagacatcgacgaggacatcatccacagaatattccgcatctgt aacatggcccggccacaggatggttatcgtatagtccagcacctccagtacattggctgg cctgcctaccgggacacgcccccctccaagcgctctctgctcaaagtggtccgacgactg gagaagtggcaggagcagtatgacgggagggagggacgtactgtggtccactgcctaaat gggggaggccgtagtggaaccttctgtgccatctgcagtgtgtgtgagatgatccagcag caaaacatcattgacgtgttccacatcgtgaaaacactgcgtaacaacaaatccaacatg gtggagaccctggaacagtataaatttgtatacgaggtggcactggaatatttaagctcc ttttag |
Protein Sequence |
>11122 : length: 1441 MASLAALALSLLLRLQLPPLPGARAQSAAGGCSFDEHYSNCGYSVALGTNGFTWEQINTW EKPMLDQAVPTGSFMMVNSSGRASGQKAHLLLPTLKENDTHCIDFHYYFSSRDRSSPGAL NVYVKVNGGPQGNPVWNVSGVVTEGWVKAELAISTFWPHFYQVIFESVSLKGHPGYIAVD EVRVLAHPCRKAPHFLRLQNVEVNVGQNATFQCIAGGKWSQHDKLWLQQWNGRDTALMVT RVVNHRRFSATVSVADTAQRSVSKYRCVIRSDGGSGVSNYAELIVKEPPTPIAPPELLAV GATYLWIKPNANSIIGDGPIILKEVEYRTTTGTWAETHIVDSPNYKLWHLDPDVEYEIRV LLTRPGEGGTGPPGPPLTTRTKCADPVHGPQNVEIVDIRARQLTLQWEPFGYAVTRCHSY NLTVQYQYVFNQQQYEAEEVIQTSSHYTLRGLRPFMTIRLRLLLSNPEGRMESEELVVQT EEDVPGAVPLESIQGGPFEEKIYIQWKPPNETNGVITLYEINYKAVGSLDPSADLSSQRG KVFKLRNETHHLFVGLYPGTTYSFTIKASTAKGFGPPVTTRIATKISAPSMPEYDTDTPL NETDTTITVMLKPAQSRGAPVSVYQLVVKEERLQKSRRAADIIECFSVPVSYRNASSLDS LHYFAAELKPANLPVTQPFTVGDNKTYNGYWNPPLSPLKSYSIYFQALSKANGETKINCV RLATKGASTQNSNTVEPEKQVDNTVKMAGVIAGLLMFIIILLGVMLTIKRRRNAYSYSYY LKLAKKQKETQSGAQREMGPVASADKPTTKLSASRNDEGFSSSSQDVNGFTDGSRGELSQ PTLTIQTHPYRTCDPVEMSYPRDQFQPAIRVADLLQHITQMKRGQGYGFKEEYEALPEGQ TASWDTAKEDENRNKNRYGNIISYDHSRVRLLVLDGDPHSDYINANYIDGYHRPRHYIAT QGPMQETVKDFWRMIWQENSASIVMVTNLVEVGRVKCVRYWPDDTEVYGDIKVTLIETEP LAEYVIRTFTVQKKGYHEIRELRLFHFTSWPDHGVPCYATGLLGFVRQVKFLNPPEAGPI VVHCSAGAGRTGCFIAIDTMLDMAENEGVVDIFNCVRELRAQRVNLVQTEEQYVFVHDAI LEACLCGNTAIPVCEFRSLYYNISRLDPQTNSSQIKDEFQTLNIVTPRVRPEDCSIGLLP RNHDKNRSMDVLPLDRCLPFLISVDGESSNYINAALMDSHKQPAAFVVTQHPLPNTVADF WRLVFDYNCSSVVMLNEMDTAQFCMQYWPEKTSGCYGPIQVEFVSADIDEDIIHRIFRIC NMARPQDGYRIVQHLQYIGWPAYRDTPPSKRSLLKVVRRLEKWQEQYDGREGRTVVHCLN GGGRSGTFCAICSVCEMIQQQNIIDVFHIVKTLRNNKSNMVETLEQYKFVYEVALEYLSS F |