| General information | Literature | Expression | Regulation | Variant | Interaction |
|
Basic Information |
|
|---|---|
Gene ID | 6672 |
Name | SP100 |
Synonym | lysp100b;SP100 nuclear antigen;SP100;SP100 nuclear antigen |
Definition | SP100-HMG nuclear autoantigen|nuclear autoantigen Sp-100|nuclear dot-associated Sp100 protein|speckled 100 kDa |
Position | 2q37.1 |
Gene Type | protein-coding |
|
TSG scores |
Description |
| TUSON ranking | 15565 |
TUSON P-value | 1 |
|
Pathways and Diseases |
|
Pathway | regulation of transcriptional activity by pml;PID BioCarta;100067 |
Disease | Neuroblastoma;FunDO |
Disease | Leukoencephalopathy;FunDO |
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External Links |
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Links to Entrez Gene | 6672 |
Links to all GeneRIF Items | 6672 |
Links to iHOP | 6672 |
|
Sequence Information |
The sequences provided here are only the longest representative sequences, not covering all the isoforms. |
Nucleotide Sequence |
>6672 : length: 2658 atggcaggtgggggcggcgacctgagcaccaggaggctgaatgaatgtatttcaccagta gcaaatgagatgaaccatcttcctgcacacagccacgatttgcaaaggatgttcacggaa gaccagggtgtagatgacaggctgctctatgacattgtattcaagcacttcaaaagaaat aaggtggagatttcaaatgcaataaaaaagacatttccattcctcgagggcctccgtgat cgtgatctcatcacaaataaaatgtttgaagattctcaagattcttgtagaaacctggtc cctgtacagagagtggtgtacaatgttcttagtgaactggagaagacatttaacctgcca gttctggaagcactgttcagcgatgtcaacatgcaggaataccccgatttaattcacatt tataaaggctttgaaaatgtaatccatgacaaattgcctctccaagaaagtgaagaagaa gagagggaggagaggtctggcctccaactaagtcttgaacaaggaactggtgaaaactct tttcgaagcctgacttggccaccttcgggttccccatctcatgctggtacaaccccacct gaaaatggactctcagagcacccctgtgaaacagaacagataaatgcaaagagaaaagat acaaccagtgacaaagatgattcgctaggaagccaacaaacaaatgaacaatgtgctcaa aaggctgagccaacagagtcctgcgaacaaattgctgtccaagtgaataatggggatgct ggaagggagatgccctgcccgttgccctgtgatgaagaaagcccagaggcagagctacac aaccatggaatccaaattaattcctgttctgtgcgactggtggatataaaaaaggaaaag ccattttctaattcaaaagttgagtgccaagcccaagcaagaactcatcataaccaggca tctgacataatagtcatcagcagtgaggactctgaaggatccactgacgttgatgagccc ttagaagtcttcatctcagcaccgagaagtgagcctgtgatcaataatgacaacccttta gaatcaaatgatgaaaaggagggccaagaagccacttgctcacgaccccagattgtacca gagcccatggatttcagaaaattatctacattcagagaaagttttaagaaaagagtgata ggacaagaccacgacttttcagaatccagtgaggaggaggcgcccgcagaagcctcgagc ggggcactgagaagcaagcatggtgagaaggctcctatgacttctagaagtacatctact tggagaatacccagcaggaagagacgtttcagcagtagtgacttttcagacctgagtaat ggagaagagcttcaggaaacctgcagctcatccctaagaagagggtcaggatcacagcca caagaacctgaaaataagaagtgctcctgtgtcatgtgttttccaaaaggtgtgccaaga agccaagaagcaaggactgaaagtagtcaagcatctgacatgatggataccatggatgtt gaaaacaattctactttggaaaaacacagtgggaaaagaagaaaaaagagaaggcataga tctaaagtaaatggtctccaaagagggagaaagaaagacagacctagaaaacatttaact ctgaataacaaagtccaaaagaaaagatggcaacaaagaggaagaaaagccaacactaga cctttgaaaagaagaagaaaaagaggtccaagaattcccaaagatgaaaatattaatttt aaacaatctgaacttcctgtgacctgtggtgaggtgaagggcactctatataaggagcga ttcaaacaaggaacctcaaagaagtgtatacagagtgaggataaaaagtggttcactccc agggaatttgaaattgaaggagaccgcggagcatccaagaactggaagctaagtatacgc tgcggtggatataccctgaaagtcctgatggagaacaaatttctgccagaaccaccaagc acaagaaaaaagagaatactggaatctcacaacaataccttagttgacccttgtccggaa aactcaaatatatgtgaggtgtgcaacaaatggggacggctgttctgctgcgacacttgt ccaagatcctttcatgagcactgccacatcccatccgtggaagctaacaagaacccgtgg agttgcatcttctgcaggataaagactattcaggaaagatgcccagaaagccaatcaggt catcaggaatctgaagtcctgatgaggcagatgctgcctgaggagcagttgaaatgtgaa ttcctcctcttgaaggtctactgtgattcgaaaagctgctttttcgcctcagaaccgtat tataacagagaggggtctcagggcccacagaagcccatgtggttaaacaaagtcaagaca agtttgaatgagcagatgtacacccgagtagaagggtttgtgcaggacatgcgtctcatc tttcataaccacaaggaattttacagggaagataaattcaccagactgggaattcaagta caggacatctttgagaagaatttcagaaacatttttgcaattcaggaaacaagcaagaac attataatgtttatttag |
Protein Sequence |
>6672 : length: 885 MAGGGGDLSTRRLNECISPVANEMNHLPAHSHDLQRMFTEDQGVDDRLLYDIVFKHFKRN KVEISNAIKKTFPFLEGLRDRDLITNKMFEDSQDSCRNLVPVQRVVYNVLSELEKTFNLP VLEALFSDVNMQEYPDLIHIYKGFENVIHDKLPLQESEEEEREERSGLQLSLEQGTGENS FRSLTWPPSGSPSHAGTTPPENGLSEHPCETEQINAKRKDTTSDKDDSLGSQQTNEQCAQ KAEPTESCEQIAVQVNNGDAGREMPCPLPCDEESPEAELHNHGIQINSCSVRLVDIKKEK PFSNSKVECQAQARTHHNQASDIIVISSEDSEGSTDVDEPLEVFISAPRSEPVINNDNPL ESNDEKEGQEATCSRPQIVPEPMDFRKLSTFRESFKKRVIGQDHDFSESSEEEAPAEASS GALRSKHGEKAPMTSRSTSTWRIPSRKRRFSSSDFSDLSNGEELQETCSSSLRRGSGSQP QEPENKKCSCVMCFPKGVPRSQEARTESSQASDMMDTMDVENNSTLEKHSGKRRKKRRHR SKVNGLQRGRKKDRPRKHLTLNNKVQKKRWQQRGRKANTRPLKRRRKRGPRIPKDENINF KQSELPVTCGEVKGTLYKERFKQGTSKKCIQSEDKKWFTPREFEIEGDRGASKNWKLSIR CGGYTLKVLMENKFLPEPPSTRKKRILESHNNTLVDPCPENSNICEVCNKWGRLFCCDTC PRSFHEHCHIPSVEANKNPWSCIFCRIKTIQERCPESQSGHQESEVLMRQMLPEEQLKCE FLLLKVYCDSKSCFFASEPYYNREGSQGPQKPMWLNKVKTSLNEQMYTRVEGFVQDMRLI FHNHKEFYREDKFTRLGIQVQDIFEKNFRNIFAIQETSKNIIMFI |