Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

400410

Name

ST20

Synonymous

suppressor of tumorigenicity 20;ST20;suppressor of tumorigenicity 20

Definition

cervical cancer suppressor-1|human cervical cancer suppressor gene 1 protein|suppressor of tumorigenicity 20 protein

Position

15q25.1

Gene Type

protein-coding

Mutation summary:

Mutations in domains
Mutational pattern in 17 major cancer types
LoF vs missense mutations
All the copy number variations from COSMIC database V72
All the mutations from COSMIC database V72

Mutation summary in protein domains

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We used uniprot protein structure data from ensemble BioMart database. The size of circle shows the relative mutation number.

The non-synonymous (top) and synonymous (bottom) mutational percentage for various cancers

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The non-synonymous mutational pattern in 17 major cancer types.
The synonymous mutational pattern in 17 major cancer types.

Loss of Function mutations compare to missense mutations

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Loss of Function mutations compare to missense mutation.
The ratio of the loss-of-function mutations over missense mutations is 0.11.

The copy number variations for various cancers

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The copy number variations in 17 major cancer groups: 1; Breast, 2; Central nervous system, 3; Cervix, 4; Endometrium, 5; Haematopoietic and lymphoid_tissue, 6; Kidney, 7; Large intestine, 8; Liver, 9; Lung, 10; NS, 11; Ovary, 12; Pancreas, 13; Prostate, 14; Skin, 15; Stomach, 16; Thyroid, 17; Urinary tract

The copy number variations in 17 major cancer types: 1; Breast, 2; Central nervous system, 3; Cervix, 4; Endometrium, 5; Haematopoietic and lymphoid_tissue, 6; Kidney, 7; Large intestine, 8; Liver, 9; Lung, 10; Not specific, 11; Ovary, 12; Pancreas, 13; Prostate, 14; Skin, 15; Stomach, 16; Thyroid, 17; Urinary tract

COSMIC somatic mutation [Top]

Mutation (CDS; AA; Chr)

Site

Histology

Mutation Type

c.207G>C; p.T69T; 15:79898964-79898964

livercarcinomaSubstitution - coding silent

c.206C>G; p.T69R; 15:79898965-79898965

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - Missense

c.130T>C; p.F44L; 15:79899041-79899041

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - Missense

c.170C>T; p.P57L; 15:79899001-79899001

haematopoietic_and_lymphoid_tissuehaematopoietic_neoplasm; acute_myeloid_leukaemiaSubstitution - Missense

c.170C>T; p.P57L; 15:79899001-79899001

haematopoietic_and_lymphoid_tissuehaematopoietic_neoplasm; acute_myeloid_leukaemiaSubstitution - Missense

c.58G>A; p.V20I; 15:79899113-79899113

urinary_tract; bladdercarcinomaSubstitution - Missense

c.190A>T; p.I64F; 15:79898981-79898981

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.202C>G; p.L68V; 15:79898969-79898969

lung; right_upper_lobecarcinoma; adenocarcinomaSubstitution - Missense

c.202C>G; p.L68V; 15:79898969-79898969

oesophaguscarcinoma; adenocarcinomaSubstitution - Missense

c.207G>T; p.T69T; 15:79898964-79898964

breastcarcinomaSubstitution - coding silent

c.185G>A; p.G62D; 15:79898986-79898986

large_intestinecarcinoma; adenocarcinomaSubstitution - Missense

c.184G>A; p.G62S; 15:79898987-79898987

large_intestine; caecumcarcinoma; adenocarcinomaSubstitution - Missense

c.234C>G; p.Y78*; 15:79898937-79898937

lungcarcinoma; squamous_cell_carcinomaSubstitution - Nonsense

c.202C>T; p.L68F; 15:79898969-79898969

lungcarcinoma; adenocarcinomaSubstitution - Missense


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