Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

5573

Name

PRKAR1A

Synonymous

protein kinase, cAMP-dependent, regulatory, type I, alpha;PRKAR1A;protein kinase, cAMP-dependent, regulatory, type I, alpha

Definition

Carney complex type 1|cAMP-dependent protein kinase regulatory subunit RIalpha|cAMP-dependent protein kinase type I-alpha regulatory chain|cAMP-dependent protein kinase type I-alpha regulatory subunit|protein kinase A type 1a regulatory subunit|tissue-spe

Position

17q24.2

Gene Type

protein-coding

Mutation summary:

Mutations in domains
Mutational pattern in 17 major cancer types
LoF vs missense mutations
All the copy number variations from COSMIC database V72
All the mutations from COSMIC database V72

Mutation summary in protein domains

Top

We used uniprot protein structure data from ensemble BioMart database. The size of circle shows the relative mutation number.

The non-synonymous (top) and synonymous (bottom) mutational percentage for various cancers

Top

The non-synonymous mutational pattern in 17 major cancer types.
The synonymous mutational pattern in 17 major cancer types.

Loss of Function mutations compare to missense mutations

Top

Loss of Function mutations compare to missense mutation.
The ratio of the loss-of-function mutations over missense mutations is 0.27.

The copy number variations for various cancers

Top

The copy number variations in 17 major cancer groups: 1; Breast, 2; Central nervous system, 3; Cervix, 4; Endometrium, 5; Haematopoietic and lymphoid_tissue, 6; Kidney, 7; Large intestine, 8; Liver, 9; Lung, 10; NS, 11; Ovary, 12; Pancreas, 13; Prostate, 14; Skin, 15; Stomach, 16; Thyroid, 17; Urinary tract

The copy number variations in 17 major cancer types: 1; Breast, 2; Central nervous system, 3; Cervix, 4; Endometrium, 5; Haematopoietic and lymphoid_tissue, 6; Kidney, 7; Large intestine, 8; Liver, 9; Lung, 10; Not specific, 11; Ovary, 12; Pancreas, 13; Prostate, 14; Skin, 15; Stomach, 16; Thyroid, 17; Urinary tract

COSMIC somatic mutation [Top]

Mutation (CDS; AA; Chr)

Site

Histology

Mutation Type

c.512G>A; p.G171E; 17:68524921-68524921

central_nervous_system; brainprimitive_neuroectodermal_tumour-medulloblastomaSubstitution - Missense

c.178-2A>T; p.?; 17:68522754-68522754

lungcarcinoma; adenocarcinomaUnknown

c.749T>G; p.L250R; 17:68527880-68527880

stomachcarcinoma; adenocarcinomaSubstitution - Missense

c.682_682delC; p.R228fs*13; 17:68525886-68525886

soft_tissue; fibrous_tissue_and_uncertain_omyxomaDeletion - Frameshift

c.665A>G; p.K222R; 17:68525869-68525869

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - Missense

c.617T>C; p.I206T; 17:68525821-68525821

stomachcarcinoma; adenocarcinomaSubstitution - Missense

c.72G>A; p.K24K; 17:68515471-68515471

endometriumcarcinoma; endometrioid_carcinomaSubstitution - coding silent

c.638C>A; p.A213D; 17:68525842-68525842

soft_tissue; fibrous_tissue_and_uncertain_omyxomaSubstitution - Missense

c.494_502+3del12; p.?; 17:68524069-68524077

soft_tissue; fibrous_tissue_and_uncertain_omyxomaUnknown

c.643G>T; p.V215F; 17:68525847-68525847

central_nervous_system; brainprimitive_neuroectodermal_tumour-medulloblastomaSubstitution - Missense

c.797C>A; p.T266K; 17:68528897-68528897

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - Missense

c.322G>T; p.E108*; 17:68522900-68522900

lungcarcinoma; squamous_cell_carcinomaSubstitution - Nonsense

c.1081C>G; p.P361A; 17:68530384-68530384

oesophaguscarcinoma; adenocarcinomaSubstitution - Missense

c.145T>C; p.F49L; 17:68515544-68515544

pancreascarcinomaSubstitution - Missense

c.1054C>T; p.R352*; 17:68530357-68530357

breastcarcinomaSubstitution - Nonsense

c.38G>A; p.R13H; 17:68515437-68515437

stomachcarcinoma; adenocarcinomaSubstitution - Missense

c.361G>T; p.D121Y; 17:68523737-68523737

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - Missense

c.440G>T; p.S147I; 17:68523816-68523816

pancreascarcinoma; acinar_carcinomaSubstitution - Missense

c.633A>G; p.R211R; 17:68525837-68525837

bone; femurEwings_sarcoma-peripheral_primitive_neuroectodermal_tumourSubstitution - coding silent

c.907C>G; p.L303V; 17:68529935-68529935

urinary_tract; bladdercarcinomaSubstitution - Missense

c.514_514delG; p.D172fs*5; 17:68524923-68524923

soft_tissue; fibrous_tissue_and_uncertain_omyxomaDeletion - Frameshift

c.834T>C; p.D278D; 17:68528934-68528934

breastcarcinoma; ER-PR-positive_carcinomaSubstitution - coding silent

c.63C>T; p.Y21Y; 17:68515462-68515462

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - coding silent

c.489_490delTG; p.V164fs*5; 17:68524064-68524065

lungcarcinoma; adenocarcinomaDeletion - Frameshift

c.84_85ins20; p.A29fs*107; 17:68515483-68515484

testissex_cord-stromal_tumour; Sertoli_cell_tumourInsertion - Frameshift

c.892-1G>A; p.?; 17:68529919-68529919

adrenal_gland; adrenal_glandadrenal_cortical_adenomaUnknown

c.428A>T; p.D143V; 17:68523804-68523804

lungcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.230C>T; p.S77L; 17:68522808-68522808

breastcarcinomaSubstitution - Missense

c.709-79_80delTT; p.?; 17:68527760-68527761

thyroidcarcinoma; papillary_carcinomaUnknown

c.124C>T; p.R42*; 17:68515523-68515523

breastcarcinomaSubstitution - Nonsense

c.892-1G>T; p.?; 17:68529919-68529919

large_intestine; coloncarcinoma; adenocarcinomaUnknown

c.499C>T; p.Q167*; 17:68524074-68524074

thyroidcarcinoma; anaplastic_carcinomaSubstitution - Nonsense

c.967T>A; p.Y323N; 17:68529995-68529995

central_nervous_system; brainprimitive_neuroectodermal_tumour-medulloblastomaSubstitution - Missense

c.947G>C; p.G316A; 17:68529975-68529975

lungcarcinoma; small_cell_carcinomaSubstitution - Missense

c.682C>T; p.R228*; 17:68525886-68525886

skinmalignant_melanomaSubstitution - Nonsense

c.441-17delCCTTCTCTCTTTTGCA; p.?; 17:68523999-68524014

adrenal_gland; adrenal_glandadrenal_cortical_hyperplasiaUnknown

c.682C>T; p.R228*; 17:68525886-68525886

skinmalignant_melanomaSubstitution - Nonsense

c.15_21delTACCGCC; p.S5fs*122; 17:68515414-68515420

breastcarcinomaDeletion - Frameshift

c.1055G>A; p.R352Q; 17:68530358-68530358

central_nervous_system; braingliomaSubstitution - Missense

c.163G>T; p.E55*; 17:68515562-68515562

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Nonsense

c.789A>T; p.E263D; 17:68528889-68528889

central_nervous_system; braingliomaSubstitution - Missense

c.18C>T; p.T6T; 17:68515417-68515417

stomachcarcinoma; adenocarcinomaSubstitution - coding silent

c.948A>G; p.G316G; 17:68529976-68529976

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - coding silent

c.977A>T; p.E326V; 17:68530280-68530280

central_nervous_system; brainprimitive_neuroectodermal_tumour-medulloblastomaSubstitution - Missense

c.687delC; p.D229fs*12; 17:68525891-68525891

soft_tissue; fibrous_tissue_and_uncertain_omyxomaDeletion - Frameshift

c.576C>T; p.T192T; 17:68525780-68525780

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - coding silent

c.7T>A; p.S3T; 17:68515406-68515406

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - Missense

c.728G>A; p.R243Q; 17:68527859-68527859

central_nervous_system; brainprimitive_neuroectodermal_tumour-medulloblastomaSubstitution - Missense

c.728G>A; p.R243Q; 17:68527859-68527859

lungcarcinoma; adenocarcinomaSubstitution - Missense

c.70A>C; p.K24Q; 17:68515469-68515469

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.892-10_905del24; p.?; 17:68529920-68529933

soft_tissue; fibrous_tissue_and_uncertain_omyxomaUnknown

c.1047G>A; p.K349K; 17:68530350-68530350

kidneycarcinoma; papillary_renal_cell_carcinomaSubstitution - coding silent

c.558T>C; p.V186V; 17:68525762-68525762

breastcarcinomaSubstitution - coding silent

c.43C>T; p.L15F; 17:68515442-68515442

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.916C>G; p.R306G; 17:68529944-68529944

kidneyWilms_tumourSubstitution - Missense

c.1111C>A; p.Q371K; 17:68530414-68530414

kidneyother; neoplasmSubstitution - Missense

c.426T>C; p.D142D; 17:68523802-68523802

prostatecarcinoma; adenocarcinomaSubstitution - coding silent

c.1019T>C; p.V340A; 17:68530322-68530322

skinmalignant_melanomaSubstitution - Missense

c.1037A>C; p.K346T; 17:68530340-68530340

upper_aerodigestive_tract; pharynxcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.1128_1129insT; p.V377fs*>7; 17:68530431-68530432

soft_tissue; fibrous_tissue_and_uncertain_omyxomaInsertion - Frameshift

c.891G>A; p.E297E; 17:68528991-68528991

soft_tissue; fibrous_tissue_and_uncertain_omyxomaSubstitution - coding silent

c.317C>T; p.T106M; 17:68522895-68522895

large_intestine; caecumcarcinoma; adenocarcinomaSubstitution - Missense

c.230C>G; p.S77*; 17:68522808-68522808

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - Nonsense

c.230C>G; p.S77*; 17:68522808-68522808

lungcarcinoma; adenocarcinomaSubstitution - Nonsense

c.503G>C; p.G168A; 17:68524912-68524912

soft_tissue; fibrous_tissue_and_uncertain_omyxomaSubstitution - Missense

c.908_926del19; p.Q304fs*21; 17:68529936-68529954

livercarcinoma; hepatocellular_carcinomaDeletion - Frameshift

c.908_926del19; p.Q304fs*21; 17:68529936-68529954

livercarcinoma; hepatocellular_carcinomaDeletion - Frameshift

c.758T>C; p.V253A; 17:68527889-68527889

large_intestine; coloncarcinoma; adenocarcinomaSubstitution - Missense

c.823C>A; p.Q275K; 17:68528923-68528923

lungcarcinoma; adenocarcinomaSubstitution - Missense

c.822G>A; p.V274V; 17:68528922-68528922

lungcarcinoma; small_cell_carcinomaSubstitution - coding silent

c.1024C>T; p.R342C; 17:68530327-68530327

skin; head_neckcarcinoma; squamous_cell_carcinomaSubstitution - Missense

c.664A>G; p.K222E; 17:68525868-68525868

adrenal_gland; adrenal_glandadrenal_cortical_adenomaSubstitution - Missense

c.241G>T; p.E81*; 17:68522819-68522819

soft_tissue; fibrous_tissue_and_uncertain_omyxomaSubstitution - Nonsense

c.843G>C; p.K281N; 17:68528943-68528943

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - Missense

c.1090G>T; p.D364Y; 17:68530393-68530393

breastcarcinomaSubstitution - Missense

c.974G>T; p.G325V; 17:68530277-68530277

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - Missense

c.142G>A; p.A48T; 17:68515541-68515541

stomachcarcinoma; adenocarcinomaSubstitution - Missense

c.289C>T; p.R97*; 17:68522867-68522867

soft_tissue; fibrous_tissue_and_uncertain_omyxomaSubstitution - Nonsense

c.138_138delC; p.M47fs*82; 17:68515543-68515543

soft_tissue; fibrous_tissue_and_uncertain_omyxomaDeletion - Frameshift

c.522_523delCT; p.F174fs*4; 17:68524931-68524932

soft_tissue; fibrous_tissue_and_uncertain_omyxomaDeletion - Frameshift

c.1076T>G; p.L359R; 17:68530379-68530379

endometriumcarcinoma; endometrioid_carcinomaSubstitution - Missense

c.329C>T; p.A110V; 17:68522907-68522907

stomachcarcinoma; adenocarcinomaSubstitution - Missense

c.1103G>A; p.R368Q; 17:68530406-68530406

large_intestine; rectumcarcinoma; adenocarcinomaSubstitution - Missense

c.608T>C; p.L203P; 17:68525812-68525812

kidneycarcinoma; clear_cell_renal_cell_carcinomaSubstitution - Missense

c.21C>T; p.A7A; 17:68515420-68515420

large_intestinecarcinoma; adenocarcinomaSubstitution - coding silent

c.21C>T; p.A7A; 17:68515420-68515420

large_intestinecarcinoma; adenocarcinomaSubstitution - coding silent

c.21C>T; p.A7A; 17:68515420-68515420

breastcarcinomaSubstitution - coding silent

c.21C>T; p.A7A; 17:68515420-68515420

large_intestinecarcinoma; adenocarcinomaSubstitution - coding silent


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