Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

1003

Name

CDH5

Synonymous

7B4|CD144;cadherin 5, type 2 (vascular endothelium);CDH5;cadherin 5, type 2 (vascular endothelium)

Definition

7B4 antigen|VE-cadherin|cadherin 5, type 2, VE-cadherin (vascular epithelium)|cadherin-5|cd144 antigen|endothelial-specific cadherin|vascular endothelial cadherin

Position

16q22.1

Gene Type

protein-coding

Gene Regulation:

Upstream microRNAs
Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Experimentally verified miRNA from miRTarBase   [Top]

Experimentally validated miRNA-TS gene regulation information.

Transcription Factors   [Top]

Regulation From TransFac database

VE-cadherin(h) + Csk(h) <==> VE-cadherin(h):Csk(h) (binding)
actin(h) + vimentin(h) + plakoglobin(h) + beta-catenin(h) + alpha-catenin(h) + VE-cadherin(h) <==> actin(h):vimentin(h):plakoglobin(h):beta-catenin(h):alpha-catenin(h):VE-cadherin(h) (binding)
plakoglobin(h) + alpha-catenin(h) + beta-catenin(h) + VE-cadherin(h) <==> plakoglobin(h):alpha-catenin(h):beta-catenin(h):VE-cadherin(h) (binding)
vimentin(h) + VE-cadherin(h) <==> vimentin(h):VE-cadherin(h) (binding)
VE-cadherin(h) + ATP --> VE-cadherin(h){p} + ADP (phosphorylation)
beta-catenin(h) + plakoglobin(h) + vimentin(h) + VE-cadherin(h) <==> beta-catenin(h):plakoglobin(h):vimentin(h):VE-cadherin(h) (binding)
VE-cadherin(h) + 3 ATP --> VE-cadherin(h){pY658}{pY685}{pY731} + 3 ADP (phosphorylation)
p120CAS(h) + VE-cadherin(h) <==> p120CAS(h):VE-cadherin(h) (binding)
beta-catenin(h) + VE-cadherin(h) <==> beta-catenin(h):VE-cadherin(h) (binding)
CDH5(h) --> VE-cadherin(h) (expression).
CDH5(h) --> VE-cadherin(h) (expression).

Post Transcriptional Modification   [Top]

Location (AA)

PTM type

Literature

Database

61N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
112N-linked (GlcNAc...).Swiss-Prot 53.0
157N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
362N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
442N-linked (GlcNAc...).Swiss-Prot 53.0
523N-linked (GlcNAc...).Swiss-Prot 53.0
535N-linked (GlcNAc...).Swiss-Prot 53.0

Methylation Profile   [Top]

There is no record for CDH5



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