Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

10397

Name

NDRG1

Synonymous

CAP43|CMT4D|DRG-1|DRG1|GC4|HMSNL|NDR1|NMSL|PROXY1|RIT42|RTP|TARG1|TDD5;N-myc downstream regulated 1;NDRG1;N-myc downstream regulated 1

Definition

N-myc downstream-regulated gene 1 protein|differentiation-related gene 1 protein|nickel-specific induction protein Cap43|protein NDRG1|protein regulated by oxygen-1|reducing agents and tunicamycin-responsive protein

Position

8q24.3

Gene Type

protein-coding

Gene Regulation:

Upstream microRNAs
Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Experimentally verified miRNA from miRTarBase   [Top]

Experimentally validated miRNA-TS gene regulation information.

Transcription Factors   [Top]

Regulation From TransFac database

NDRG1(h) + 5 ATP --SGK-1(m.s.)--> NDRG1(h){pT328}{pS330}{pT346}{pT356}{pT366} + 5 ADP (phosphorylation)
NDRG1(h) --> NDRG1(h) (expression).
NDRG1(h) + HCV-NS5A-1B(HCV1B) <==> NDRG1(h):HCV-NS5A-1B(HCV1B) (binding)
NDRG1(h) + 3 ATP --SGK-1(h)--> NDRG1(h){pT346}{pT356}{pT366} + 3 ADP (phosphorylation)
NDRG1(h) + 4 ATP --SGK-1(m.s.)--> NDRG1(h){pT328}{pT346}{pT356}{pT366} + 4 ADP (phosphorylation)
NDRG1(h) --> NDRG1(h) (expression).

Post Transcriptional Modification   [Top]

Location (AA)

PTM type

Literature

Database

319Phosphoserine.Swiss-Prot 53.0
326Phosphoserine.Swiss-Prot 53.0
328Phosphothreonine.Swiss-Prot 53.0
330Phosphoserine.Swiss-Prot 53.0
335Phosphothreonine (By similarity).Swiss-Prot 53.0
336Phosphoserine.Swiss-Prot 53.0
319Phosphoserine15302935Phospho.ELM 6.0
330Phosphoserine15302935Phospho.ELM 6.0
336Phosphoserine15302935Phospho.ELM 6.0
366Phosphothreonine15461589Phospho.ELM 6.0
346Phosphothreonine15461589Phospho.ELM 6.0
356Phosphothreonine15461589Phospho.ELM 6.0
352Phosphoserine15461589Phospho.ELM 6.0
362Phosphoserine15461589Phospho.ELM 6.0
328Phosphothreonine15461589Phospho.ELM 6.0
342Phosphoserine15461589Phospho.ELM 6.0

Methylation Profile   [Top]

Chromosome

Location

Source

chr8

Promoter: 134378180 - 134380180Agilent_014791

chr8

Promoter: 134378180 - 134380180GSE27584

chr8

Promoter: 134378180 - 134380180Agilent_014791_44K


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