Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

23327

Name

NEDD4L

Synonymous

NEDD4-2|NEDD4.2|RSP5|hNEDD4-2;neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase;NEDD4L;neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase

Definition

E3 ubiquitin-protein ligase NEDD4-like|ubiquitin-protein ligase Rsp5

Position

18q21.31

Gene Type

protein-coding

Gene Regulation:

Upstream microRNAs
Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Experimentally verified miRNA from miRTarBase   [Top]

Experimentally validated miRNA-TS gene regulation information.

Transcription Factors   [Top]

Regulation From TransFac database

Nedd4-2(h) + SGK-1(h) <==> Nedd4-2(h):SGK-1(h) (binding)
alphaENaC(h) + Nedd4-2(h) <==> alphaENaC(h):Nedd4-2(h) (binding)
Smad7(m) + Nedd4-2(h) <==> Smad7(m):Nedd4-2(h) (binding)
Nedd4-2(h) + Smad7(m.s.) <==> Nedd4-2(h):Smad7(m.s.) (binding)
Smad6(m.s.) + Nedd4-2(h) <==> Smad6(m.s.):Nedd4-2(h) (binding)
Nedd4-2(h) + Smad2(m.s.) <==> Nedd4-2(h):Smad2(m.s.) (binding)
Smad3(m.s.) + Nedd4-2(h) <==> Smad3(m.s.):Nedd4-2(h) (binding)
Smad1(m.s.) + Nedd4-2(h) <==> Smad1(m.s.):Nedd4-2(h) (binding)
Smad5(m.s.) + Nedd4-2(h) <==> Smad5(m.s.):Nedd4-2(h) (binding)
Smad7(m.s.) + Nedd4-2(h) + TGFbetaR-I(m.s.):TGFbetaR-II(m.s.) <==> Smad7(m.s.):Nedd4-2(h):TGFbetaR-I(m.s.):TGFbetaR-II(m.s.) (binding)
Nedd4-2(h) + Smad2(m.s.) + SnoN(m.s.) <==> Nedd4-2(h):Smad2(m.s.):SnoN(m.s.) (binding)
trkA(r) + Nedd4-2(h) <==> trkA(r):Nedd4-2(h) (binding)
14-3-3sigma(m.s.) + Nedd4-2(h) <==> 14-3-3sigma(m.s.):Nedd4-2(h) (binding)
NEDD4L(h) --> Nedd4-2(h) (expression).
trkA(r) + ubiquitin(b) --E1(rb),Ubc5B(rb),Nedd4-2(h)--> trkA(r){ub} (ubiquitination)
trkA(r) + ubiquitin(h) --Nedd4-2(h)--> trkA(r){ub} (ubiquitination)
NEDD4L(h) --> Nedd4-2-xbb1(h) (expression).
NEDD4L(h) --> Nedd4-2-isoform4(h) (expression).
NEDD4L(h) --> Nedd4-2-isoform5(h) (expression).
NEDD4L(h) --> Nedd4-2-isoform1(h) (expression).
NEDD4L(h) --> Nedd4-2-isoform6(h) (expression).
NEDD4L(h) --> Nedd4-2-isoform7(h) (expression).

Post Transcriptional Modification   [Top]

Location (AA)

PTM type

Literature

Database

302Phosphothreonine (By similarity).Swiss-Prot 53.0
342Phosphoserine (by PKA) (Probable).Swiss-Prot 53.0
367Phosphothreonine (by SGK) (Probable).Swiss-Prot 53.0
446Phosphoserine (By similarity).Swiss-Prot 53.0
448Phosphoserine (by PKA and SGK).Swiss-Prot 53.0
479Phosphoserine.Swiss-Prot 53.0
483Phosphoserine.Swiss-Prot 53.0
487Phosphoserine.Swiss-Prot 53.0
449Phosphoserine17081983Phospho.ELM 6.0
479Phosphoserine17081983Phospho.ELM 6.0
483Phosphoserine17081983Phospho.ELM 6.0
487Phosphoserine17081983Phospho.ELM 6.0

Methylation Profile   [Top]

Chromosome

Location

Source

chr18

Promoter: 53861278 - 53863278Agilent_014791

chr18

Promoter: 53861278 - 53863278GSE27584

chr18

Promoter: 53861278 - 53863278Agilent_014791_44K


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