Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

26018

Name

LRIG1

Synonymous

LIG-1|LIG1;leucine-rich repeats and immunoglobulin-like domains 1;LRIG1;leucine-rich repeats and immunoglobulin-like domains 1

Definition

leucine-rich repeat protein LRIG1|leucine-rich repeats and immunoglobulin-like domains protein 1|ortholog of mouse integral membrane glycoprotein LIG-1

Position

3p14

Gene Type

protein-coding

Gene Regulation:

Upstream microRNAs
Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Experimentally verified miRNA from miRTarBase   [Top]

Experimentally validated miRNA-TS gene regulation information.

Transcription Factors   [Top]

Regulation From TransFac database

LRIG1(h) --> LRIG1-isoform1(h) (expression).
ErbB1(m.s.) + LRIG-1(h) <==> ErbB1(m.s.):LRIG-1(h) (binding)
ErbB2(m.s.) + LRIG-1(h) <==> ErbB2(m.s.):LRIG-1(h) (binding)
ErbB3(m.s.) + LRIG-1(h) <==> LRIG-1(h):ErbB3(m.s.) (binding)
ErbB4(m.s.) + LRIG-1(h) <==> LRIG-1(h):ErbB4(m.s.) (binding)
c-Cbl(m.s.) + LRIG-1(h) <==> c-Cbl(m.s.):LRIG-1(h) (binding)
LRIG-1(h) + ubiquitin(h) --> LRIG-1(h){ub} (ubiquitination)
LRIG1(h) --> LRIG-1(h) (expression).
LRIG1(h) --> LRIG1-isoform2(h) (expression).
LRIG1-xbb1(h) + ErbB1(h) <==> LRIG1-xbb1(h):ErbB1(h) (binding)
LRIG1-xbb1(h) + ErbB2(h) <==> LRIG1-xbb1(h):ErbB2(h) (binding)
LRIG1-xbb1(h) + ErbB3(h) <==> LRIG1-xbb1(h):ErbB3(h) (binding)
LRIG1-xbb1(h) + ErbB4(h) <==> LRIG1-xbb1(h):ErbB4(h) (binding)
LRIG1(h) --> LRIG1-xbb1(h) (expression).

Post Transcriptional Modification   [Top]

Location (AA)

PTM type

Literature

Database

74N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
150N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
246N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
292N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
318N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
684N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0

Methylation Profile   [Top]

Chromosome

Location

Source

chr3

Promoter: 66633035 - 66635035Agilent_014791

chr3

Promoter: 66633035 - 66635035GSE27584

chr3

Promoter: 66633035 - 66635035Agilent_014791_44K

chr3

Promoter: 66633035 - 66635035Agilent_014791


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