Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

64326

Name

RFWD2

Synonymous

COP1|RNF200;ring finger and WD repeat domain 2, E3 ubiquitin protein ligase;RFWD2;ring finger and WD repeat domain 2, E3 ubiquitin protein ligase

Definition

E3 ubiquitin-protein ligase RFWD2|RING finger protein 200|constitutive photomorphogenesis protein 1 homolog|putative ubiquitin ligase COP1

Position

1q25.1-q25.2

Gene Type

protein-coding

Gene Regulation:

Upstream microRNAs
Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Experimentally verified miRNA from miRTarBase   [Top]

Experimentally validated miRNA-TS gene regulation information.

Transcription Factors   [Top]

Regulation From TransFac database

COP1(h) + DET1(h) <==> COP1(h):DET1(h) (binding)
DDB1(m) + COP1(h) <==> DDB1(m):COP1(h) (binding)
c-Jun(h) + COP1(h) <==> c-Jun(h):COP1(h) (binding)
p53(h) + COP1(h) <==> p53(h):COP1(h) (binding)
COP1(h) + Roc1(h) <==> COP1(h):Roc1(h) (binding)
COP1(h) --/ p21Cip1(h) (decrease of abundance)
COP1(h) --/ p53(h) (decrease of abundance)
RFWD2(h) --> COP1(h) (expression).
c-Jun(h) + n ubiquitin(h) --COP1(h),DET1(h)--> c-Jun(h){ub(n)} (ubiquitination)
c-Jun(h) + n ubiquitin(v.s.) --E1(rb),Ubc5C(h),DET1(h),DDB1(h),CUL4A(m),Roc1(h),COP1(h),ATP--> c-Jun(h){ub(n)} (ubiquitination)
p53(h) + n ubiquitin(v.s.) --COP1(h)--> p53(h){ub(n)} (ubiquitination)
p53(h) + n ubiquitin(v.s.) --E1(rb),Ubc5A(h),COP1(h)--> p53(h){ub(n)} (ubiquitination)
RFWD2(h) --> COP1-isoform1(h) (expression).
RFWD2(h) --> COP1-isoform2(h) (expression).
RFWD2(h) --> COP1-isoform3(h) (expression).

Post Transcriptional Modification   [Top]

There is no record for RFWD2

Methylation Profile   [Top]

Chromosome

Location

Source

chr1

Promoter: 174442493 - 174444493Agilent_014791

chr1

Promoter: 174442493 - 174444493GSE27584

chr1

Promoter: 174442493 - 174444493GSE27584

chr1

Promoter: 174442493 - 174444493Agilent_014791_44K

chr1

Promoter: 174442493 - 174444493Agilent_014791


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