Pulmonary Arterial Hypertension KnowledgeBase (bioinfom_tsdb)
bioinfom_tsdb
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

8572

Name

PDLIM4

Synonymous

RIL;PDZ and LIM domain 4;PDLIM4;PDZ and LIM domain 4

Definition

LIM domain protein|LIM protein RIL|PDZ and LIM domain protein 4|enigma homolog|reversion-induced LIM protein

Position

5q31.1

Gene Type

protein-coding

Gene Regulation:

Upstream microRNAs
Transcription Factors
Post Transcriptional Modification From dbPTM
Methylation Profile From DiseaseMeth database

Experimentally verified miRNA from miRTarBase   [Top]

Experimentally validated miRNA-TS gene regulation information.

Transcription Factors   [Top]

Regulation From TransFac database

Ril(h) + FAP-1(m) <==> Ril(h):FAP-1(m) (binding)
NR2C(h) + Ril(h) <==> NR2C(h):Ril(h) (binding)
Ril(h) + rbpms(h) <==> Ril(h):rbpms(h) (binding)
RIL(h) --> Ril(h) (expression).
RIL(h) --> Ril-isoform1(h) (expression).
RIL(h) --> Ril-isoform2(h) (expression).

Post Transcriptional Modification   [Top]

Location (AA)

PTM type

Literature

Database

112Phosphoserine (By similarity).Swiss-Prot 53.0
120Phosphoserine (By similarity).Swiss-Prot 53.0

Methylation Profile   [Top]

Chromosome

Location

Source

chr5

Promoter: 131619786 - 131621786Agilent_014791

chr5

Promoter: 131619786 - 131621786GSE27584

chr5

Promoter: 131619786 - 131621786Agilent_014791_44K

chr5

Promoter: 131619786 - 131621786PMID:17332327

chr5

Promoter: 131619786 - 131621786PMID:16489065


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