Bioinformatics and Systems Medicine Laboratory
General information | Expression | Regulation | Mutation | Interaction

Basic Information

Gene ID

196528

Name

ARID2

Synonym

BAF200|p200;AT rich interactive domain 2 (ARID, RFX-like);ARID2;AT rich interactive domain 2 (ARID, RFX-like)

Definition

ARID domain-containing protein 2|AT-rich interactive domain-containing protein 2|BRG1-associated factor 200|zinc finger protein with activation potential|zipzap|zipzap/p200

Position

12q12

Gene Type

protein-coding

Source

Count: 2; Pubmed_search,Generif

Literature support

Count: 2 PubMed records as below.

Evidence Status

Description

reviewed

ARID2: a new tumor suppressor gene in hepatocellular carcinoma.

potential

"18.2% of individuals with HCV-associated HCC in the United States and Europe harbored ARID2 inactivation mutations, suggesting that ARID2 is a tumor suppressor gene that is relatively commonly mutated in this tumor subtype."
More detail of all 2 literatures about ARID2

External Links

Links to Entrez Gene

196528

Links to all GeneRIF Items

196528

Links to iHOP

196528

Sequence Information

Nucleotide Sequence

>196528 : length: 5508
atggcaaactcgacggggaaggcgcctccggacgagcggagaaagggactcgctttcctg
gacgagctgcggcagttccaccacagcagagggtcgccttttaaaaaaatccctgcggtg
ggtgggaaggagctggatcttcacggtctctacaccagagtcactactttaggcggattc
gcgaaggtttctgagaagaatcagtggggagaaattgttgaagagttcaactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttgcgttacctagaaaagtac
gagaaagttcatcattttggggaggatgatgatgaggtaccaccaggcaatccaaagcca
cagcttcctattggtgcaattccatcttcctacaattaccagcaacacagtgtgtcggat
tatctgcgtcaaagttatgggctgtccatggactttaattcgccaaatgattataataaa
ttggtgctttcactgttatctggactcccaaatgaagtggactttgctattaacgtatgc
actctcctatcaaatgaaagcaagcacgtcatgcaacttgaaaaagatcctaaaatcatc
actttactacttgctaatgccggggtgtttgacgacactttaggatccttttccactgta
tttggagaagaatggaaagagaagactgatagagacttcgttaagttttggaaagacatc
gttgatgataatgaagttcgtgacctcatttctgacagaaacaagtctcatgaaggtaca
tcaggagaatggatttgggagtctttatttcatccacctcgaaagctgggcattaacgat
attgaaggacagcgggtacttcagattgcagtgattttgagaaatctttcctttgaggag
ggcaatgttaagctcttggcagctaatcgtacctgtcttcgtttcctattactttctgca
catagtcattttatttctttaaggcaattaggccttgacacattaggaaatattgcagct
gagcttttactggaccctgttgatttcaaaactactcatctgatgtttcatactgttaca
aaatgtctaatgtcaagggatagatttttaaagatgagaggcatggaaattttgggaaat
ctttgcaaagcagaagataatggtgttttaatttgtgaatatgtggatcaggattcctac
agagagatcatttgtcatctcactttacctgatgtgctgcttgtaatctcaacactcgag
gtgctatacatgctcacggaaatgggagatgttgcttgcacaaaaattgcaaaagtagaa
aagagcatagacatgttagtgtgtctggtttctatggatattcagatgtttggccctgat
gcactagctgcggtaaaactcattgaacacccaagttccagtcatcaaatgttatctgaa
attaggccacaagctatagagcaagtccaaacccagactcatgtagcatctgccccagct
tccagagcagttgtagcgcagcatgttgctccacctccaggaatagtggaaatagatagt
gagaagtttgcttgtcagtggctaaatgctcattttgaagtaaatccagattgttctgtt
tctcgagcagaaatgtattctgaatacctctcgacttgcagtaaattagctcgtggtgga
atcctaacatcaactggattttataaatgtcttagaacggtctttccaaatcatacagtg
aagagagtggaggattccagtagcaatgggcaggcacatattcatgtggtaggagtaaaa
cggagggctataccacttcccattcagatgtactatcagcagcaaccagtttctacttct
gttgttcgtgttgattctgttcctgatgtatctcctgctccttcacctgcaggaatccct
catggatcacaaaccataggaaaccattttcagaggactcctgttgccaaccaatcttca
aatctgactgcaacacaaatgtcttttcctgtacaaggtgttcatactgtggcacaaact
gtttcaagaattccacaaaatccttcacctcatacccaccagcaacaaaatgctccagtg
actgtcattcaaagtaaagctccaattccttgtgaagttgttaaggctacagttatccag
aattccataccccagacaggagttcctgttagtattgctgttggaggaggacctccacag
agttctgttgttcagaatcatagtacagggccacaacctgttacagttgtgaattctcag
acattgcttcaccatccatctgtaattccacagcagtctccattacacacagtggtacca
ggacagatcccttcaggcactcctgttacagtaattcaacaagctgtcccacagagtcat
atgtttggcagagtacagaacataccagcatgtacttctacagtttcacagggtcaacag
ttaatcaccacatcaccccaacctgtgcaaacttcatctcaacagacatcagctggtagc
cagtcacaagatactgttatcatagcacccccacagtatgtaacaacttctgcatccaat
attgtctcagcaacttcagtacagaattttcaggtagctacaggacaaatggttactatt
gctggtgtcccaagtccacaagcctcaagggtagggtttcagaacattgcaccaaaacct
ctcccttctcagcaagtttcatctacagtggtacagcagcctattcaacaaccacagcag
ccaacccaacaaagcgtagtgattgtaagccagccagctcaacaaggtcaaacttatgca
ccagccattcaccaaattgttcttgctaatccagcagctcttccagctggtcagacagtt
cagctaactggacaacctaacataactccatcttcttcaccatcacctgtcccagctact
aataaccaagtccctactgccatgtcgtcgtcctctacccctcaatcacagggaccacct
cctactgtcagtcaaatgttatctgtgaaaaggcagcaacagcagcaacattcaccagca
cccccaccacagcaggtacaagtacaagttcagcagccccaacaagtacagatgcaagtt
caacctcaacagtcgaatgcaggagttggtcagcctgcctctggtgagtcgagtctgatt
aaacagcttctgcttccgaaacgtggtccttcaacaccaggtggtaagcttattctccca
gctccacagattcctccccctaataatgcaagagctcctagccctcaggtggtctatcag
gtggccagtaaccaagccgcaggttttggagtgcaggggcaaactccagctcagcagcta
ttggttgggcagcaaaatgttcagttggtcccaagtgcaatgccaccctcagggggagta
caaactgtgcccatttcgaacttacaaatattgccaggtccactgatctcaaatagccca
gcaaccattttccaagggacttctggcaaccaggtaaccataacagttgtgccaaatacg
agttttgcacctgcaactgtgagtcagggaaatgcaactcagctcattgctccagcagga
attaccatgagcggaacgcagacaggagttggacttccagtacaaacgcttccagccact
caagcatctcctgctggacaatcatcatgtactactgctactcccccattcaaaggtgat
aaaataatttgccaaaaggaggaggaagcaaaggaagcaacaggtttacatgttcatgaa
cgtaaaattgaagtcatggagaacccgtcctgccgacgaggagccacaaacaccagcaat
ggggatacaaaggaaaatgaaatgcatgtgggaagtcttttaaatgggagaaagtacagt
gactcaagtctacctccttcaaactcagggaaaattcaaagtgagactaatcagtgctca
ctaatcagtaatgggccatcattggaattaggtgagaatggagcatctgggaaacagaac
tcagaacaaatagacatgcaagatatcaaaagtgatttgagaaaaccgctagttaatgga
atctgtgattttgataaaggagatggttctcatttaagcaaaaacattccaaatcataaa
acttccaatcatgtaggaaatggtgagatatctccaatggaaccacaagggactttagat
atcactcagcaagatactgccaaaggtgatcaactagaaagaatttctaatggacctgta
ttaactttgggtggttcatctgtgagcagtatacaggaggcttcaaatgcggcaacacag
caatttagtggtactgatttgcttaatggacctctagcttcaagtttgaattcagatgtg
cctcagcaacgcccaagtgtagttgtctcaccacattctacaacctctgttatacaggga
catcaaatcatagcagttcccgactcaggatcaaaagtatcccattctcctgccctatca
tctgacgttcggtctacaaatggcacagcagaatgcaaaactgtaaagaggccagcagag
gatactgatagggaaacagtcgcaggaattccaaataaagtaggagttagaattgttaca
atcagtgaccccaacaatgctggctgcagcgcaacaatggttgctgtgccagcaggagca
gatccaagcactgtagctaaagtagcaatagaaagtgctgttcagcaaaagcaacagcat
ccaccaacatatgtacagaatgtggtcccgcagaacactcctatgccaccttcaccagct
gtacaagtgcagggccagcctaacagttctcagccttctccattcagtggatccagtcag
cctggagatccaatgagaaaacctggacagaacttcatgtgtctgtggcagtcttgtaaa
aagtggtttcagacaccctcacaggttttctaccatgcagcaactgaacatggaggaaaa
gatgtatatccagggcagtgtctttgggaaggttgtgagccttttcagcgacagcggttt
tcttttattacccacttgcaggataagcactgttcaaaggatgccctacttgcaggatta
aaacaagatgaaccaggacaagcaggaagtcagaagtcttctaccaagcagccaactgta
gggggcacaagctcaactcctagagcacaaaaggccattgtgaatcatcccagtgctgca
cttatggctctgaggagaggatcaagaaaccttgtctttcgagattttacagatgaaaaa
gagggaccaataactaaacacatccgactaacagctgccttaatattaaaaaatattggt
aaatattcagaatgtggtcgcagattgttaaagagacatgaaaataacttatcagtgcta
gccattagtaacatggaagcttcctccacccttgccaaatgcctttatgaacttaatttt
acagttcagagtaaggaacaagaaaaagactcagaaatgctgcagtga

Protein Sequence

>196528 : length: 1835
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLIEHPSSSHQMLSE
IRPQAIEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSSNGQAHIHVVGVK
RRAIPLPIQMYYQQQPVSTSVVRVDSVPDVSPAPSPAGIPHGSQTIGNHFQRTPVANQSS
NLTATQMSFPVQGVHTVAQTVSRIPQNPSPHTHQQQNAPVTVIQSKAPIPCEVVKATVIQ
NSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
GQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
QSQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQASRVGFQNIAPKP
LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
QLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPA
PPPQQVQVQVQQPQQVQMQVQPQQSNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILP
APQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQTPAQQLLVGQQNVQLVPSAMPPSGGV
QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFAPATVSQGNATQLIAPAG
ITMSGTQTGVGLPVQTLPATQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
RKIEVMENPSCRRGATNTSNGDTKENEMHVGSLLNGRKYSDSSLPPSNSGKIQSETNQCS
LISNGPSLELGENGASGKQNSEQIDMQDIKSDLRKPLVNGICDFDKGDGSHLSKNIPNHK
TSNHVGNGEISPMEPQGTLDITQQDTAKGDQLERISNGPVLTLGGSSVSSIQEASNAATQ
QFSGTDLLNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPDSGSKVSHSPALS
SDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKVGVRIVTISDPNNAGCSATMVAVPAGA
DPSTVAKVAIESAVQQKQQHPPTYVQNVVPQNTPMPPSPAVQVQGQPNSSQPSPFSGSSQ
PGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
SFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSTKQPTVGGTSSTPRAQKAIVNHPSAA
LMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVL
AISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ



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