Bioinformatics and Systems Medicine Laboratory
General information | Expression | Regulation | Mutation | Interaction

Basic Information

Gene ID

5789

Name

PTPRD

Synonym

HPTP|HPTPD|HPTPDELTA|PTPD|RPTPDELTA;protein tyrosine phosphatase, receptor type, D;PTPRD;protein tyrosine phosphatase, receptor type, D

Definition

R-PTP-delta|protein tyrosine phosphatase, receptor type, delta polypeptide|protein-tyrosine phosphatase delta|receptor-type tyrosine-protein phosphatase delta

Position

9p23-p24.3

Gene Type

protein-coding

Source

Count: 2; Pubmed_search,Generif

Literature support

Count: 4 PubMed records as below.

Evidence Status

Description

potential

High resolution ArrayCGH and expression profiling identifies PTPRD and PCDH17/PCH68 as tumor suppressor gene candidates in laryngeal squamous cell carcinoma.

reviewed

A catalog of genes homozygously deleted in human lung cancer and the candidacy of PTPRD as a tumor suppressor gene.

potential

These results implicate PTPRD as a tumor suppressor on chromosome 9p that is involved in the development of glioblastoma multiforme and multiple human cancers.

potential

data identify PTPRD as a candidate tumor suppressor gene in cutaneous squamous cell carcinoma with a possible association with metastasis.
More detail of all 4 literatures about PTPRD

External Links

Links to Entrez Gene

5789

Links to all GeneRIF Items

5789

Links to iHOP

5789

Sequence Information

Nucleotide Sequence

>5789 : length: 4509
atggtgcacgtagccaggctgctgctgctgctcctcactttcttcctccgcacggatgct
gagacacctccaaggtttacacgaacacccgttgatcagacaggggtctctggcggagtt
gcctctttcatctgccaagctacgggagacccaagacctaaaattgtctggaacaaaaaa
ggaaagaaagtcagcaatcagagatttgaggtaatagagtttgacgatgggtctggatca
gttctcagaatacaacccttacggactccgagggatgaggccatttatgaatgtgtggcc
tcaaataatgtgggagaaataagtgtatccaccagactcacagttttgcgggaagatcaa
attcccaggggcttccctaccattgacatgggcccacagttgaaggtggttgagcgtact
cgcacggccaccatgctttgtgcagccagtggtaatccggatccagaaatcacttggttt
aaagatttcttacctgtggacacaagcaacaacaatggtcgtattaagcagttacgatca
ggtggtacaccaataagaggagcccttcagattgagcagagtgaagagtctgaccaagga
aaatatgagtgtgttgccaccaacagcgcgggcactcgctattccgctcctgccaattta
tatgtcagagagctgcgagaagttcgccgtgtcccaccaagattctctatcccacccact
aatcatgaaatcatgccaggcggaagcgttaatatcacctgtgtggccgtggggtcacca
atgccttatgtaaagtggatgttgggggcagaagatctgacacctgaagatgatatgcca
ataggaagaaatgtgctagaactgaatgatgtaagacagtcagcaaattacacctgtgtt
gctatgtcaacactgggtgtcattgaagcaatagcacagatcactgtcaaagccttaccc
aaacctccaggaactcctgtagtgaccgagagcacagctacaagcatcacactgacgtgg
gactctgggaaccctgagcctgtttcttattacataattcagcataaacctaaaaactct
gaggaactttacaaagaaattgatggggtggcgaccacacgctacagtgtcgctggacta
agtccctactcggattatgaattcagggttgttgctgtcaataacattgggcgggggcct
cccagcgaacctgtgctaacacaaacctcagagcaagcaccatccagtgccccgagggat
gtccaggcacgaatgttgagttcgaccaccattttggtacagtggaaggaacctgaagag
ccaaatggacagatccaaggatatagagtttattatacaatggatcccactcaacatgtc
aacaactggatgaaacacaatgtagctgacagccaaatcactactattggcaacttagtg
ccccagaaaacatattctgtcaaagtcctggcttttacctcaattggagatggtcccctt
tcaagtgacatacaagtcatcactcagacaggagtaccagggcagccactaaacttcaaa
gcagaacctgagtctgaaacaagtattttgctctcttggacacctccacgttcagatacc
attgccaactatgaactggtctacaaagatggggagcatggagaggagcaacgaattacc
attgagccagggacatcatataggctgcaaggactgaaaccaaacagcttatactatttc
cgtctggctgcacgctcccctcaaggcctgggtgcttctactgcagaaatatcagctaga
accatgcagtcaatgtttgcaaaaaattttcatgtcaaagcagtaatgaagacttccgtg
ttgctgtcttgggagattccagagaattataactccgccatgcctttcaaaattctttat
gatgatgggaaaatggtagaagaagtggatggccgagccacacagaagttaattgtcaac
ctgaagcctgagaaatcatattcatttgtgctgacaaatcgtggaaacagtgctggtggg
ctgcagcacagggtcacggcaaagactgcaccagatgtattacgtaccaagcctgccttc
attgggaagaccaacttggatggcatgattactgtgcaactgcctgaagtacctgcaaat
gagaatataaaaggttactacataataattgtgcctttgaagaaatctcgcgggaaattt
atcaagccatgggagagtccagatgaaatggaattagatgagctgcttaaggagatatct
aggaagcgcagaagcatccgttatgggagagaagttgaattaaagccatatattgccgct
cactttgatgtccttcccactgagttcaccctgggggatgacaagcattatggtggattt
acaaacaagcaactccaaagtggtcaagaatatgtcttctttgtgttagcagtaatggaa
catgcagagtctaagatgtatgcaaccagcccttactccgaccccgtggtgtcaatggat
ctggatccgcagccaatcacggatgaagaagaaggcttgatctgggttgtaggtcctgtc
cttgcagtggtctttatcatctgcattgtcattgctattcttctttataaaagtaaaccc
gacaggaagagggcagagtccgactctagaaaaagcagcataccgaacaataaggagatc
ccttcacaccacccaacagaccctgtagaactgaggcgccttaactttcaaacaccgggt
atggctagccatcctccaatacccatcttggaacttgcagaccacattgaaagattgaaa
gcaaatgacaacttgaagttttcccaggaatatgagtcaattgaccctggccagcagttc
acttgggaacattcaaacttggaagtaaacaaaccaaagaatagatacgcgaatgtaatc
gcatatgatcattcccgggttctcctatcagctatagaagggatcccaggaagtgactat
gtgaatgccaactacatagatgggtataggaagcaaaatgcctatattgcaacacaggga
tctctccccgaaacatttggggacttttggagaatgatatgggaacaacggagtgccaca
gttgtcatgatgacaaaactagaagaaagatcaagggtgaagtgtgaccagtattggcct
agcagaggcacagaaacccacggactcgttcaagtaacgctgcttgatactgtggagctg
gccacatattgtgttcgaacatttgcactttacaagaatggttcaagtgagaagagagaa
gtgagacaattccagttcaccgcctggcctgatcatggtgttccagaacaccctacacct
tttctagctttcttacgtagagtcaaaacctgtaaccctcccgatgctggtccgatggtt
gtgcactgcagtgcgggagttggccggactggttgcttcatcgtcatagatgccatgtta
gaaagaataaagcatgaaaaaactgtagatatttatggccatgtaactttaatgagagcc
cagaggaactatatggttcaaacagaagaccaatacatctttatccatgatgcactgtta
gaagcagtgacttgtggaaataccgaagtgccagctagaaacttgtatgcctacattcag
aagctgacacaaatagaaacgggagagaatgtcacaggaatggagctcgaatttaagcgt
ctagccagctcaaaagctcacacctcaaggtttatcagtgccaatcttccatgtaataaa
ttcaaaaatcgccttgttaatattatgccatatgaatccacaagggtatgcctgcagcct
atccgtggagtagaaggatctgattacatcaatgccagttttattgatggatacagacaa
cagaaagcctacatcgctacccaggggcccttggcagagaccactgaagacttctggcgg
atgctctgggaacacaattccaccatagttgtgatgctcaccaagctgcgtgaaatgggc
agagagaaatgtcaccaatactggccagcagaacggtctgcaagataccagtactttgtt
gtagatcccatggctgagtacaacatgccacagtatatcctaagggaattcaaggtcaca
gatgccagggacggccagtcccgaacagtaaggcagttccagttcactgactggccagag
caaggagtgccaaagtccggagaaggatttattgacttcatcggccaagtccataaaaca
aaagaacagtttggccaagatggacccatttcagtccattgcagcgcgggcgttggaaga
actggagtcttcataacgctaagcattgttttggaaagaatgagatatgaaggagttgta
gatatcttccagactgtcaaaatgttaagaacacaacgaccagctatggtacagacagag
gatcaatatcagttttcctatcgtgccgcactagagtacctgggcagctttgaccactat
gcaacgtag

Protein Sequence

>5789 : length: 1502
MVHVARLLLLLLTFFLRTDAETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKK
GKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQ
IPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRS
GGTPIRGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRELREVRRVPPRFSIPPT
NHEIMPGGSVNITCVAVGSPMPYVKWMLGAEDLTPEDDMPIGRNVLELNDVRQSANYTCV
AMSTLGVIEAIAQITVKALPKPPGTPVVTESTATSITLTWDSGNPEPVSYYIIQHKPKNS
EELYKEIDGVATTRYSVAGLSPYSDYEFRVVAVNNIGRGPPSEPVLTQTSEQAPSSAPRD
VQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTIGNLV
PQKTYSVKVLAFTSIGDGPLSSDIQVITQTGVPGQPLNFKAEPESETSILLSWTPPRSDT
IANYELVYKDGEHGEEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISAR
TMQSMFAKNFHVKAVMKTSVLLSWEIPENYNSAMPFKILYDDGKMVEEVDGRATQKLIVN
LKPEKSYSFVLTNRGNSAGGLQHRVTAKTAPDVLRTKPAFIGKTNLDGMITVQLPEVPAN
ENIKGYYIIIVPLKKSRGKFIKPWESPDEMELDELLKEISRKRRSIRYGREVELKPYIAA
HFDVLPTEFTLGDDKHYGGFTNKQLQSGQEYVFFVLAVMEHAESKMYATSPYSDPVVSMD
LDPQPITDEEEGLIWVVGPVLAVVFIICIVIAILLYKSKPDRKRAESDSRKSSIPNNKEI
PSHHPTDPVELRRLNFQTPGMASHPPIPILELADHIERLKANDNLKFSQEYESIDPGQQF
TWEHSNLEVNKPKNRYANVIAYDHSRVLLSAIEGIPGSDYVNANYIDGYRKQNAYIATQG
SLPETFGDFWRMIWEQRSATVVMMTKLEERSRVKCDQYWPSRGTETHGLVQVTLLDTVEL
ATYCVRTFALYKNGSSEKREVRQFQFTAWPDHGVPEHPTPFLAFLRRVKTCNPPDAGPMV
VHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRAQRNYMVQTEDQYIFIHDALL
EAVTCGNTEVPARNLYAYIQKLTQIETGENVTGMELEFKRLASSKAHTSRFISANLPCNK
FKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWR
MLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVT
DARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGR
TGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDQYQFSYRAALEYLGSFDHY
AT



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