Search Results
| No. | VISDB ID | Virus Name | Subtype | Virus Genome | Breakpoint 1 | Breakpoint 2 | Human Genome | Chr | Start | End | Loci | Target Gene | Sample Type | Disease | Method | PubMed ID | Year | Curated Way |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81 | TVIS43000051 | Merkel cell polyomavirus | - |
EU375803 |
4078 | 2067 | GRCh38 | chr6 | 20635170 | 20635170 | p22.2 | CDKAL1 | Cell line | Merkel cell carcinoma | Detection of integrated papilloma sequences & PCR (DIPS-PCR) | 30873613 | 2019 | VISDB1.0 |
| 82 | TVIS43000052 | Merkel cell polyomavirus | - |
EU375803 |
3775 | - | GRCh38 | chr2 | 197433173 | 197433173 | q33.1 | SF3B1 | Cell line | Merkel cell carcinoma | Detection of integrated papilloma sequences & PCR (DIPS-PCR) | 30873613 | 2019 | VISDB1.0 |
| 83 | TVIS43000053 | Merkel cell polyomavirus | - |
EU375803 |
5043 | 1529 | GRCh38 | chr1 | 10790267 | 10790267 | p36.22 | CASZ1 | Cell line | Merkel cell carcinoma | Detection of integrated papilloma sequences & PCR (DIPS-PCR) | 30873613 | 2019 | VISDB1.0 |
| 84 | TVIS43000054 | Merkel cell polyomavirus | - |
EU375803 |
3322 | 3300 | GRCh38 | chr12 | 69690384 | 69690384 | q14.3 | ENSG00000305711, BEST3 | Cell line | Merkel cell carcinoma | Detection of integrated papilloma sequences & PCR (DIPS-PCR) | 30873613 | 2019 | VISDB1.0 |
| 85 | TVIS43000055 | Merkel cell polyomavirus | - |
EU375803 |
4991 | 4880 | GRCh38 | chr11 | 25063435 | 25063435 | p14.3 | LUZP2 | Cell line | Merkel cell carcinoma | Detection of integrated papilloma sequences & PCR (DIPS-PCR) | 30873613 | 2019 | VISDB1.0 |
| 86 | TVIS43000044 | Merkel cell polyomavirus | - |
HM355825.1 |
- | - | hg19 | chr1 | 31431851 | 31431851 | p35.2 | SERINC2, ENSG00000305880 | Tumor | Merkel cell carcinoma | de novo assembly of RNA-seq reads | 28049147 | 2017 | VISDB1.0 |
| 87 | TVIS43000045 | Merkel cell polyomavirus | - |
HM355825.1 |
- | - | hg19 | chr1 | 31468089 | 31468209 | p35.2 | ENSG00000305880 | Tumor | Merkel cell carcinoma | de novo assembly of RNA-seq reads | 28049147 | 2017 | VISDB1.0 |
| 88 | TVIS43000046 | Merkel cell polyomavirus | - |
HM355825.1 |
- | - | hg19 | chr6 | 20758199 | 20758199 | p22.3 | ENSG00000233848, CDKAL1 | Tumor | Merkel cell carcinoma | de novo assembly of RNA-seq reads | 28049147 | 2017 | VISDB1.0 |
| 89 | TVIS43000047 | Merkel cell polyomavirus | - |
HM355825.1 |
- | - | hg19 | chr20 | 33544888 | 33544888 | q11.22 | CBFA2T2 | Tumor | Merkel cell carcinoma | de novo assembly of RNA-seq reads | 28049147 | 2017 | VISDB1.0 |
| 90 | TVIS43000048 | Merkel cell polyomavirus | - |
HM355825.1 |
- | - | hg19 | chr3 | 182462813 | 182462813 | q26.33 | LINC01994 | Tumor | Merkel cell carcinoma | de novo assembly of RNA-seq reads | 28049147 | 2017 | VISDB1.0 |
