Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS43000051 Merkel cell polyomavirus - EU375803
 4078 2067 GRCh38 chr6 20635170 20635170 p22.2 CDKAL1 Cell line Merkel cell carcinoma Detection of integrated papilloma sequences & PCR (DIPS-PCR) 30873613 2019 VISDB1.0
TVIS43000052 Merkel cell polyomavirus - EU375803
 3775 - GRCh38 chr2 197433173 197433173 q33.1 SF3B1 Cell line Merkel cell carcinoma Detection of integrated papilloma sequences & PCR (DIPS-PCR) 30873613 2019 VISDB1.0
TVIS43000053 Merkel cell polyomavirus - EU375803
 5043 1529 GRCh38 chr1 10790267 10790267 p36.22 CASZ1 Cell line Merkel cell carcinoma Detection of integrated papilloma sequences & PCR (DIPS-PCR) 30873613 2019 VISDB1.0
TVIS43000054 Merkel cell polyomavirus - EU375803
 3322 3300 GRCh38 chr12 69690384 69690384 q14.3 ENSG00000305711, BEST3 Cell line Merkel cell carcinoma Detection of integrated papilloma sequences & PCR (DIPS-PCR) 30873613 2019 VISDB1.0
TVIS43000055 Merkel cell polyomavirus - EU375803
 4991 4880 GRCh38 chr11 25063435 25063435 p14.3 LUZP2 Cell line Merkel cell carcinoma Detection of integrated papilloma sequences & PCR (DIPS-PCR) 30873613 2019 VISDB1.0
TVIS43000044 Merkel cell polyomavirus - HM355825.1
 - - hg19 chr1 31431851 31431851 p35.2 SERINC2, ENSG00000305880 Tumor Merkel cell carcinoma de novo assembly of RNA-seq reads 28049147 2017 VISDB1.0
TVIS43000045 Merkel cell polyomavirus - HM355825.1
 - - hg19 chr1 31468089 31468209 p35.2 ENSG00000305880 Tumor Merkel cell carcinoma de novo assembly of RNA-seq reads 28049147 2017 VISDB1.0
TVIS43000046 Merkel cell polyomavirus - HM355825.1
 - - hg19 chr6 20758199 20758199 p22.3 ENSG00000233848, CDKAL1 Tumor Merkel cell carcinoma de novo assembly of RNA-seq reads 28049147 2017 VISDB1.0
TVIS43000047 Merkel cell polyomavirus - HM355825.1
 - - hg19 chr20 33544888 33544888 q11.22 CBFA2T2 Tumor Merkel cell carcinoma de novo assembly of RNA-seq reads 28049147 2017 VISDB1.0
TVIS43000048 Merkel cell polyomavirus - HM355825.1
 - - hg19 chr3 182462813 182462813 q26.33 LINC01994 Tumor Merkel cell carcinoma de novo assembly of RNA-seq reads 28049147 2017 VISDB1.0