Gene: LINC00395

100874157
-
long intergenic non-protein coding RNA 395
ncRNA
13q21.31
Ensembl:ENSG00000231061
NC_000013.11
SNP Mapped
1   ANCO-SNPs
AD
0   
NA (AD)  NA (ND)   (Frontal_Cortex)
NA (AD)  NA (ND)

ANCO-SNPs

SNP ID Position Alleles Trait Variation Type
rs2810864chr13:63667981 (GRCh38.p7)G>Aalcohol dependenceSNV(Single Nucleotide Variation)

DNA Methylation

There is no related methylation information for this gene.

Gene Expression in Different Tissues

Temporal and Spatial Expressions (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes average value of the expressions.

Top Co-expressed Genes in Brain-Frontal Cortex (BA9) (GTEx v7)

Top 10 positively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
GGTLC20.516
CRCT10.492
CTAG1A0.474
LIMS30.47
FOXR20.413
KRTAP10-120.402
OR10A30.38
KRT780.372
CSN1S10.343
GUCA2A0.336

Top 10 negatively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
FGFRL1-0.231
ENTPD2-0.222
S1PR1-0.215
EFEMP1-0.209
KHNYN-0.208
PLEKHO2-0.208
FKBP10-0.205
PLSCR4-0.204
F3-0.203
GJA1-0.202

Drugs/Compounds

    There is no DrugBank record for this gene !

    There is no CTD record for this GENE !

GO/Pathway

GO ID GO Term Qualifier Evidence PubMed
GO ID GO Term Qualifier Evidence PubMed
GO ID GO Term Qualifier Evidence PubMed
KEGG ID KEGG Term
Reactome ID Reactome Term Evidence

Interactions (STRING v10.5, Interaction Score >= 0.400)

There is no Interaction data for this gene.

Publications (Co-occurrence of gene symbol strings and ANCO-Dependence terms)

PMID Title (Year) Author Journal