Gene: TEX29

121793
C13orf16|bA474D23.1
testis expressed 29
protein-coding
13q34
Ensembl:ENSG00000153495 Vega:OTTHUMG00000017358 UniprotKB:Q8N6K0
NC_000013.11
SNP Mapped
2   ANCO-SNPs
ND|AD
0   
2.630e-2 (AD)  8.474e-1 (ND)   (Frontal_Cortex)
1.002e-1 (AD)  3.196e-1 (ND)

ANCO-SNPs

SNP ID Position Alleles Trait Variation Type
rs2479956chr13:111329052 (GRCh38.p7)T>Calcohol dependenceSNV(Single Nucleotide Variation)
rs2479955chr13:111328131 (GRCh38.p7)A>Galcohol dependenceSNV(Single Nucleotide Variation)

DNA Methylation

There is no related methylation information for this gene.

Gene Expression in Different Tissues

Temporal and Spatial Expressions (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes average value of the expressions.

Top Co-expressed Genes in Brain-Frontal Cortex (BA9) (GTEx v7)

Top 10 positively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
CABP10.657
HAGHL0.65
SOHLH10.646
FIZ10.645
SCN1B0.644
ZFYVE190.644
SAC3D10.638
ADAP10.635
RNF2080.635
ARHGDIG0.631

Top 10 negatively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
ARHGEF35-0.459
SDR42E1-0.436
SPTLC3-0.433
TFPI2-0.425
FCAR-0.424
AGTR1-0.424
ATP11C-0.422
KIAA0040-0.422
VNN2-0.42
C1orf87-0.419

Drugs/Compounds

    There is no DrugBank record for this gene !

ID Drug Name Action PubMed
D000082AcetaminophenAcetaminophen results in decreased expression of TEX29 mRNA22230336
C006780bisphenol Abisphenol A results in decreased expression of TEX29 mRNA25181051
D019327Copper SulfateCopper Sulfate results in increased expression of TEX29 mRNA19549813
D010936Plant ExtractsPlant Extracts results in decreased expression of TEX29 mRNA23557933
D014635Valproic AcidValproic Acid results in increased methylation of TEX29 gene29154799
D001335Vehicle EmissionsVehicle Emissions results in decreased methylation of TEX29 gene25560391

GO/Pathway

GO ID GO Term Qualifier Evidence PubMed
GO ID GO Term Qualifier Evidence PubMed
GO ID GO Term Qualifier Evidence PubMed
GO:0016021integral component of membrane-IEA-  
KEGG ID KEGG Term
Reactome ID Reactome Term Evidence

Interactions (STRING v10.5, Interaction Score >= 0.400)

There is no Interaction data for this gene.

Publications (Co-occurrence of gene symbol strings and ANCO-Dependence terms)

PMID Title (Year) Author Journal