Gene: NKX2-3

159296
CSX3|NK2.3|NKX2.3|NKX2C|NKX4-3
NK2 homeobox 3
protein-coding
10q24.2
Ensembl:ENSG00000119919 MIM:606727 Vega:OTTHUMG00000018887 UniprotKB:Q8TAU0
NG_016854.1
PubMed
ND
1   
NA (AD)  NA (ND)   (Frontal_Cortex)
1.645e-1 (AD)  2.158e-1 (ND)

DNA Methylation

There is no related methylation information for this gene.

Gene Expression in Different Tissues

Temporal and Spatial Expressions (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes average value of the expressions.

Top Co-expressed Genes in Brain-Frontal Cortex (BA9) (GTEx v7)

Top 10 positively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
ZBED20.567
KCNJ10.543
ENTHD10.524
AMBN0.523
CHAT0.516
DRD30.507
LINC005340.505
GPR1010.502
TMPRSS60.492
SAG0.49

Top 10 negatively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
HPSE2-0.266
RNF182-0.226
CLDN1-0.22
ALDH1A1-0.213
SYTL2-0.208
ART5-0.205
PYGM-0.201
SH2D7-0.195
C1orf189-0.188
GTDC1-0.188

Drugs/Compounds

    There is no DrugBank record for this gene !

ID Drug Name Action PubMed
C5112952,2',4,4'-tetrabromodiphenyl ether"2,2',4,4'-tetrabromodiphenyl ether results in decreased expression of NKX2-3 mRNA"27291303
D016604Aflatoxin B1Aflatoxin B1 results in decreased methylation of NKX2-3 gene27153756
C015001arsenitearsenite results in increased methylation of NKX2-3 promoter23974009
D001564Benzo(a)pyreneBenzo(a)pyrene results in increased expression of NKX2-3 mRNA22228805
C006780bisphenol Abisphenol A affects the methylation of NKX2-3 promoter27334623
C006780bisphenol Abisphenol A results in decreased expression of NKX2-3 mRNA25181051
C118739entinostatentinostat results in decreased expression of NKX2-3 mRNA27188386
D053260SootSoot results in increased expression of NKX2-3 mRNA26551751
D013749TetrachlorodibenzodioxinTetrachlorodibenzodioxin affects the expression of NKX2-3 mRNA24058054
D013749TetrachlorodibenzodioxinTetrachlorodibenzodioxin affects the expression of NKX2-3 mRNA22298810
C016805tris(1,3-dichloro-2-propyl)phosphate"tris(1,3-dichloro-2-propyl)phosphate results in decreased expression of NKX2-3 mRNA"26179874
D014635Valproic AcidValproic Acid affects the expression of NKX2-3 mRNA25979313

GO/Pathway

GO ID GO Term Qualifier Evidence PubMed
GO:0000981RNA polymerase II transcription factor activity, sequence-specific DNA binding-ISA-  
GO:0000981RNA polymerase II transcription factor activity, sequence-specific DNA binding-ISM19274049  
GO:0000981RNA polymerase II transcription factor activity, sequence-specific DNA binding-NAS19274049  
GO:0003674molecular_function-ND-  
GO:0043565sequence-specific DNA binding-IEA-  
GO ID GO Term Qualifier Evidence PubMed
GO:0001776leukocyte homeostasis-IEA-  
GO:0002317plasma cell differentiation-IEA-  
GO:0006351transcription, DNA-templated-IEA-  
GO:0006641triglyceride metabolic process-IEA-  
GO:0008150biological_process-ND-  
GO:0022612gland morphogenesis-IEA-  
GO:0030225macrophage differentiation-IEA-  
GO:0042127regulation of cell proliferation-IEA-  
GO:0042475odontogenesis of dentin-containing tooth-IEA-  
GO:0043367CD4-positive, alpha-beta T cell differentiation-IEA-  
GO:0045944positive regulation of transcription by RNA polymerase II-IEA-  
GO:0048535lymph node development-IEA-  
GO:0048536spleen development-IEA-  
GO:0048541Peyer's patch development-IEA-  
GO:0048621post-embryonic digestive tract morphogenesis-IEA-  
GO:0050900leukocyte migration-IEA-  
GO ID GO Term Qualifier Evidence PubMed
GO:0005575cellular_component-ND-  
GO:0005634nucleus-IEA-  
KEGG ID KEGG Term
Reactome ID Reactome Term Evidence

Interactions (STRING v10.5, Interaction Score >= 0.400)

Publications (Co-occurrence of gene symbol strings and ANCO-Dependence terms)

PMID Title (Year) Author Journal
19953089Differences in genetic background between active smokers, passive smokers, and non-smokers with Crohn's disease. (2010 May)van der Heide FAm J Gastroenterol