Gene: SNORA66

26782
RNU66|U66
small nucleolar RNA, H/ACA box 66
snoRNA
1p22.1
Ensembl:ENSG00000207523
NC_000001.11
SNP Mapped
1   ANCO-SNPs
AD
0   
NA (AD)  NA (ND)   (Frontal_Cortex)
3.373e-1 (AD)  7.889e-1 (ND)

ANCO-SNPs

SNP ID Position Alleles Trait Variation Type
rs10874744chr1:92840760 (GRCh38.p7)G>Aalcohol dependenceSNV(Single Nucleotide Variation)

DNA Methylation

There is no related methylation information for this gene.

Gene Expression in Different Tissues

Temporal and Spatial Expressions (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes average value of the expressions.

Top Co-expressed Genes in Brain-Frontal Cortex (BA9) (GTEx v7)

Top 10 positively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
NPIPA80
ZDHHC140
ZDHHC140
ZDHHC170
ZDHHC170
ZDHHC160
ZDHHC160
ZDHHC110
ZDHHC110
ZDHHC130

Top 10 negatively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
NPIPA80
ZDHHC140
ZDHHC140
ZDHHC170
ZDHHC170
ZDHHC160
ZDHHC160
ZDHHC110
ZDHHC110
ZDHHC130

Drugs/Compounds

    There is no DrugBank record for this gene !

ID Drug Name Action PubMed
C561695(+)-JQ1 compound(+)-JQ1 compound results in decreased expression of SNORA66 mRNA24796395
D014635Valproic AcidValproic Acid results in decreased methylation of SNORA66 gene29154799

GO/Pathway

GO ID GO Term Qualifier Evidence PubMed
GO ID GO Term Qualifier Evidence PubMed
GO:0006396RNA processing-IEA-  
GO ID GO Term Qualifier Evidence PubMed
GO:0005730nucleolus-IEA-  
KEGG ID KEGG Term
Reactome ID Reactome Term Evidence

Interactions (STRING v10.5, Interaction Score >= 0.400)

There is no Interaction data for this gene.

Publications (Co-occurrence of gene symbol strings and ANCO-Dependence terms)

PMID Title (Year) Author Journal