Gene: LINC00668

400643
-
long intergenic non-protein coding RNA 668
ncRNA
18p11.31
Ensembl:ENSG00000265933
NC_000018.10
SNP Mapped
1   ANCO-SNPs
AD
0   
NA (AD)  NA (ND)   (Frontal_Cortex)
5.742e-1 (AD)  1.262e-1 (ND)

ANCO-SNPs

SNP ID Position Alleles Trait Variation Type
rs4797265chr18:6928181 (GRCh38.p7)G>A / G>C / G>Talcohol dependenceSNV(Single Nucleotide Variation)

DNA Methylation

There is no related methylation information for this gene.

Gene Expression in Different Tissues

Top Co-expressed Genes in Brain-Frontal Cortex (BA9) (GTEx v7)

Top 10 positively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
OR5AP20.77
TRIM400.765
OR2W50.763
MYF50.752
DUXA0.737
INSL40.735
OR4K50.729
OR5H150.72
TAAR20.716
SLC7A130.713

Top 10 negatively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
TMEM221-0.278
PVALB-0.262
LYPD6-0.245
ERBB4-0.244
ACSL6-0.242
ABCD2-0.241
HPSE2-0.24
DLX1-0.237
KCNA2-0.231
PAH-0.231

Drugs/Compounds

    There is no DrugBank record for this gene !

ID Drug Name Action PubMed
C000944dicrotophosdicrotophos results in increased expression of LINC00668 mRNA28302478
C561695(+)-JQ1 compound(+)-JQ1 compound results in decreased expression of LINC00668 mRNA26752646
C013320tris(2-butoxyethyl) phosphatetris(2-butoxyethyl) phosphate affects the expression of LINC00668 mRNA29024780

GO/Pathway

GO ID GO Term Qualifier Evidence PubMed
GO ID GO Term Qualifier Evidence PubMed
GO ID GO Term Qualifier Evidence PubMed
KEGG ID KEGG Term
Reactome ID Reactome Term Evidence

Interactions (STRING v10.5, Interaction Score >= 0.400)

There is no Interaction data for this gene.

Publications (Co-occurrence of gene symbol strings and ANCO-Dependence terms)

PMID Title (Year) Author Journal