Gene: C1orf220

400798
-
chromosome 1 open reading frame 220 (putative)
ncRNA
1q25.2
Ensembl:ENSG00000213057 UniprotKB:Q5T0J3
NC_000001.11
SNP Mapped
2   ANCO-SNPs
AD
0   
NA (AD)  NA (ND)   (Frontal_Cortex)
1.602e-3 (AD)  2.422e-1 (ND)

ANCO-SNPs

SNP ID Position Alleles Trait Variation Type
rs10913569chr1:178548873 (GRCh38.p7)A>Galcohol dependenceSNV(Single Nucleotide Variation)
rs4233175chr1:178548456 (GRCh38.p7)A>Galcohol dependenceSNV(Single Nucleotide Variation)

DNA Methylation

There is no related methylation information for this gene.

Gene Expression in Different Tissues

Temporal and Spatial Expressions (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes average value of the expressions.

Top Co-expressed Genes in Brain-Frontal Cortex (BA9) (GTEx v7)

Top 10 positively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
SPRY30.639
ZBED40.626
ZNF6230.592
ZNF4900.579
PROX20.579
AMER10.576
ZNF7740.571
ZNF5490.569
CSNK1G10.567
CEPT10.566

Top 10 negatively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
APOM-0.324
S100A1-0.297
COPZ2-0.295
S100A13-0.294
PHYHD1-0.291
AZGP1-0.288
NOTCH2NL-0.287
KIF19-0.282
CCT6B-0.276
RAB13-0.276

Drugs/Compounds

    There is no DrugBank record for this gene !

ID Drug Name Action PubMed
D000082AcetaminophenAcetaminophen results in decreased expression of C1ORF220 mRNA29067470

GO/Pathway

GO ID GO Term Qualifier Evidence PubMed
GO ID GO Term Qualifier Evidence PubMed
GO ID GO Term Qualifier Evidence PubMed
KEGG ID KEGG Term
Reactome ID Reactome Term Evidence

Interactions (STRING v10.5, Interaction Score >= 0.400)

There is no Interaction data for this gene.

Publications (Co-occurrence of gene symbol strings and ANCO-Dependence terms)

PMID Title (Year) Author Journal