Gene info: ID 619207

Gene: SCART1

GENE ID: 619207

Synonyms: -

Description: scavenger receptor family member expressed on T cells 1

Gene type: pseudo

Location: 10q26.3

dbXrefs: Ensembl:ENSG00000214279

RefSeq: NC_000010.11

Retrived from: SNP Mapped

SNPs: 1 ANCO-SNPs

Phenotype: AD

# Publications: 0

Sherlock p-value : 9.049e-1 (AD) 7.900e-1 (ND) (Frontal_Cortex)

Pascal p-value : 3.192e-1 (AD) 2.274e-1 (ND)

ANCO-SNPs

SNP ID	Position	Alleles	Trait	Variation Type
rs2814209	chr10:133468697 (GRCh38.p7)	T>C	alcohol dependence	SNV(Single Nucleotide Variation)

DNA Methylation

There is no related methylation information for this gene.

Gene Expression in Different Tissues

Temporal and Spatial Expressions (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes average value of the expressions.

There is no DrugBank record for this gene !

ID	Drug Name	Action	PubMed
D014635	Valproic Acid	Valproic Acid results in increased methylation of SCART1 gene	29154799

GO/Pathway

GO ID	GO Term	Qualifier	Evidence	PubMed
GO:0003674	molecular_function	-	ND	-
GO:0005044	scavenger receptor activity	-	IEA	-

GO ID	GO Term	Qualifier	Evidence	PubMed
GO:0002456	T cell mediated immunity	-	NAS	22795646
GO:0006898	receptor-mediated endocytosis	-	IEA	-
GO:0006954	inflammatory response	-	IBA	21873635
GO:0008150	biological_process	-	ND	-
GO:0042102	positive regulation of T cell proliferation	-	IBA	21873635
GO:1900017	positive regulation of cytokine production involved in inflammatory response	-	IBA	21873635

GO ID	GO Term	Qualifier	Evidence	PubMed
GO:0005737	cytoplasm	-	IDA	22795646
GO:0005903	brush border	-	IDA	22795646
GO:0009897	external side of plasma membrane	-	IBA	21873635
GO:0016021	integral component of membrane	-	IEA	-

KEGG ID	KEGG Term

Reactome ID	Reactome Term	Evidence

Interactions (STRING v10.5, Interaction Score >= 0.400)

There is no Interaction data for this gene.

Publications (Co-occurrence of gene symbol strings and ANCO-Dependence terms)

PMID	Title (Year)	Author	Journal