Gene: SSX4

6759
CT5.4
SSX family member 4
protein-coding
Xp11.23
Ensembl:ENSG00000268009 MIM:300326 Vega:OTTHUMG00000022698 UniprotKB:O60224
NC_000023.11
PubMed
0   ANCO-SNPs
ND
1   
NA (AD)  NA (ND)   (Frontal_Cortex)
NA (AD)  NA (ND)

DNA Methylation

There is no related methylation information for this gene.

Top Co-expressed Genes in Brain-Frontal Cortex (BA9) (GTEx v7)

Top 10 positively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
RNASE120.509
NKX1-10.469
EIF3CL0.44
HIST2H3A0.416
TFF20.403
MRGPRX10.387
AKR1B100.383
CXorf490.372
MAGED40.366
MC3R0.363

Top 10 negatively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
THNSL2-0.249
TCF19-0.235
ZNF880-0.189
GIMAP2-0.187
ADRB2-0.178
CATSPERG-0.178
TBX15-0.177
CCDC114-0.174
VSTM4-0.172
FCN1-0.172

Drugs/Compounds

    There is no DrugBank record for this gene !

ID Drug Name Action PubMed
D018501Antirheumatic AgentsAntirheumatic Agents results in increased expression of SSX4 mRNA24449571
D002104CadmiumCadmium results in decreased expression of SSX4 mRNA24376830
C014347decitabinedecitabine affects the expression of SSX4 mRNA18240144
C014347decitabinedecitabine results in increased expression of SSX4 mRNA19401350|2038186
D002117CalcitriolCalcitriol results in decreased expression of SSX4 mRNA21592394
D002117Calcitriol[Testosterone co-treated with Calcitriol] results in decreased expression of SSX4 mRNA21592394
D004397FonofosFonofos results in decreased methylation of SSX4 promoter22847954
C561695(+)-JQ1 compound(+)-JQ1 compound results in decreased expression of SSX4 mRNA24796395
D010278ParathionParathion results in decreased methylation of SSX4 promoter22847954
D010662Phenylmercuric AcetatePhenylmercuric Acetate results in increased expression of SSX4 mRNA26272509
C012568terbufosterbufos results in decreased methylation of SSX4 promoter22847954
D013739Testosterone[Testosterone co-treated with Calcitriol] results in decreased expression of SSX4 mRNA21592394
D013739TestosteroneTestosterone results in decreased expression of SSX4 mRNA21592394

GO/Pathway

GO ID GO Term Qualifier Evidence PubMed
GO:0003676nucleic acid binding-IEA-  
GO ID GO Term Qualifier Evidence PubMed
GO:0006351transcription, DNA-templated-IEA-  
GO:0006355regulation of transcription, DNA-templated-IEA-  
GO ID GO Term Qualifier Evidence PubMed
GO:0005634nucleus-IEA-  
KEGG ID KEGG Term
Reactome ID Reactome Term Evidence

Interactions (STRING v10.5, Interaction Score >= 0.400)

Publications (Co-occurrence of gene symbol strings and ANCO-Dependence terms)

PMID Title (Year) Author Journal
16299236Cancer-testis genes are coordinately expressed and are markers of poor outcome in non-small cell lung cancer. (2005 Nov 15)Gure AOClin Cancer Res