Gene: C20orf187

728434
-
chromosome 20 open reading frame 187 (putative)
ncRNA
20p12.2
Ensembl:ENSG00000125899 UniprotKB:Q9UGB4
NC_000020.11
SNP Mapped
1   ANCO-SNPs
AD
0   
NA (AD)  NA (ND)   (Frontal_Cortex)
NA (AD)  NA (ND)

ANCO-SNPs

SNP ID Position Alleles Trait Variation Type
rs2024683chr20:10863192 (GRCh38.p7)A>Galcohol dependenceSNV(Single Nucleotide Variation)

DNA Methylation

There is no related methylation information for this gene.

Gene Expression in Different Tissues

Temporal and Spatial Expressions (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes average value of the expressions.

Top Co-expressed Genes in Brain-Frontal Cortex (BA9) (GTEx v7)

Top 10 positively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
POM121L120.734
OR6K20.726
SLC17A30.72
CDC20B0.71
FOXD20.707
TDRD150.704
PTGDR0.703
UGT2A10.699
ALX40.698
NR5A20.684

Top 10 negatively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
NDP-0.253
PTCHD1-0.237
CADM1-0.23
SORCS2-0.227
FAM184A-0.224
SLC1A4-0.221
C2orf72-0.221
ADCY2-0.218
KIAA0930-0.218
GRM3-0.212

Drugs/Compounds

    There is no DrugBank record for this gene !

ID Drug Name Action PubMed
D000535Aluminum[APP protein modified form binds to Aluminum] which results in decreased expression of C20ORF187 mRNA21298039

GO/Pathway

GO ID GO Term Qualifier Evidence PubMed
GO ID GO Term Qualifier Evidence PubMed
GO ID GO Term Qualifier Evidence PubMed
KEGG ID KEGG Term
Reactome ID Reactome Term Evidence

Interactions (STRING v10.5, Interaction Score >= 0.400)

There is no Interaction data for this gene.

Publications (Co-occurrence of gene symbol strings and ANCO-Dependence terms)

PMID Title (Year) Author Journal