Gene: RBM48

84060
C7orf64|HSPC304
RNA binding motif protein 48
protein-coding
7q21.2
Ensembl:ENSG00000127993 Vega:OTTHUMG00000159535 UniprotKB:Q5RL73
NC_000007.14
SNP Mapped
1   ANCO-SNPs
AD
0   
NA (AD)  NA (ND)   (Frontal_Cortex)
2.996e-1 (AD)  7.019e-1 (ND)

ANCO-SNPs

SNP ID Position Alleles Trait Variation Type
rs929412chr7:92536548 (GRCh38.p7)C>Talcohol dependenceSNV(Single Nucleotide Variation)

DNA Methylation

There is no related methylation information for this gene.

Gene Expression in Different Tissues

Temporal and Spatial Expressions (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes average value of the expressions.

Top Co-expressed Genes in Brain-Frontal Cortex (BA9) (GTEx v7)

Top 10 positively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
PCID20.903
USP280.868
TRIM520.865
FLCN0.862
ABCC50.858
HERC40.853
IFT200.853
HINFP0.852
TBCK0.85
RNF144A0.848

Top 10 negatively co-expressed genes

Gene Symbol Pearson Correlation Coefficient
OR4F5-0.436
KLRB1-0.426
OR4F29-0.391
KLRF1-0.368
TIGIT-0.366
IL2RB-0.348
TBX21-0.34
ASB4-0.338
LRAT-0.335
ENDOU-0.335

Drugs/Compounds

    There is no DrugBank record for this gene !

ID Drug Name Action PubMed
D001280AtrazineAtrazine results in increased expression of RBM48 mRNA25929836
C006780bisphenol Abisphenol A affects the expression of RBM48 mRNA21786754
C006780bisphenol Abisphenol A results in increased expression of RBM48 mRNA25181051
D003300Copper[Disulfiram binds to Copper] which results in decreased expression of RBM48 mRNA24690739
C089595cylindrospermopsincylindrospermopsin results in increased expression of RBM48 mRNA24921660
D002945Cisplatin[Cisplatin co-treated with jinfukang] results in decreased expression of RBM48 mRNA27392435
C015835dimethyl-4-toluidinedimethyl-4-toluidine results in increased expression of RBM48 mRNA27638505
D004221Disulfiram[Disulfiram binds to Copper] which results in decreased expression of RBM48 mRNA24690739
C024565ethylene dichlorideethylene dichloride results in decreased expression of RBM48 mRNA28189721
D005485FlutamideFlutamide results in increased expression of RBM48 mRNA24793618
D005557FormaldehydeFormaldehyde results in decreased expression of RBM48 mRNA20655997
D005557FormaldehydeFormaldehyde results in increased expression of RBM48 mRNA23649840
D017313FenretinideFenretinide results in increased expression of RBM48 mRNA28973697
D006861Hydrogen PeroxideHydrogen Peroxide results in decreased expression of RBM48 mRNA18951874
C544151jinfukang[Cisplatin co-treated with jinfukang] results in decreased expression of RBM48 mRNA27392435
C544151jinfukangjinfukang results in decreased expression of RBM48 mRNA27392435
C045463leflunomideleflunomide results in increased expression of RBM48 mRNA28988120
C004925methylmercuric chloridemethylmercuric chloride results in decreased expression of RBM48 mRNA28001369
D008741Methyl MethanesulfonateMethyl Methanesulfonate results in increased expression of RBM48 mRNA26011545
D008741Methyl MethanesulfonateMethyl Methanesulfonate results in increased expression of RBM48 mRNA23649840
C568376MT19c compoundMT19c compound results in increased expression of RBM48 mRNA21781307
D010662Phenylmercuric AcetatePhenylmercuric Acetate results in decreased expression of RBM48 mRNA26272509
C005556propionaldehydepropionaldehyde results in decreased expression of RBM48 mRNA26079696
D014028Tobacco Smoke PollutionTobacco Smoke Pollution results in increased expression of RBM48 mRNA28065790
D014520UrethaneUrethane affects the expression of RBM48 mRNA28818685
D014635Valproic AcidValproic Acid affects the expression of RBM48 mRNA25979313
D014635Valproic AcidValproic Acid results in decreased expression of RBM48 mRNA23179753
D001335Vehicle EmissionsVehicle Emissions results in decreased methylation of RBM48 gene25560391
C025643vinclozolinvinclozolin results in decreased expression of RBM48 mRNA22615374

GO/Pathway

GO ID GO Term Qualifier Evidence PubMed
GO:0003723RNA binding-IEA-  
GO ID GO Term Qualifier Evidence PubMed
GO ID GO Term Qualifier Evidence PubMed
GO:0005654nucleoplasm-IBA21873635  
GO:0005654nucleoplasm-IDA-  
KEGG ID KEGG Term
Reactome ID Reactome Term Evidence

Interactions (STRING v10.5, Interaction Score >= 0.400)

There is no Interaction data for this gene.

Publications (Co-occurrence of gene symbol strings and ANCO-Dependence terms)

PMID Title (Year) Author Journal