SNP ID | Position | Alleles | Trait | Variation Type |
---|---|---|---|---|
rs11060883 | chr12:130419855 (GRCh38.p7) | A>G | nicotine dependence | SNV(Single Nucleotide Variation) |
Gene Symbol | Pearson Correlation Coefficient |
---|---|
PRAMEF5 | 0.602 |
LPA | 0.521 |
TEX35 | 0.501 |
NCAPG | 0.482 |
CENPF | 0.453 |
UCHL1-AS1 | 0.434 |
CES3 | 0.43 |
CYP4F2 | 0.419 |
GPR78 | 0.417 |
ATOH7 | 0.417 |
Gene Symbol | Pearson Correlation Coefficient |
---|---|
AKAP3 | -0.269 |
AAMDC | -0.259 |
MYOM1 | -0.256 |
HVCN1 | -0.238 |
AZGP1 | -0.236 |
ID3 | -0.235 |
AKR1C3 | -0.234 |
COPZ2 | -0.226 |
HIGD1B | -0.224 |
MEIG1 | -0.224 |
ID | Drug Name | Action | PubMed |
---|---|---|---|
C511295 | 2,2',4,4'-tetrabromodiphenyl ether | "2,2',4,4'-tetrabromodiphenyl ether results in decreased expression of PIWIL1 mRNA" | 28712647 |
C006780 | bisphenol A | bisphenol A affects the expression of PIWIL1 mRNA | 21786754 |
C006780 | bisphenol A | bisphenol A results in decreased expression of PIWIL1 mRNA | 25181051 |
D003300 | Copper | Copper affects the expression of PIWIL1 mRNA | 23825565 |
D016572 | Cyclosporine | Cyclosporine results in decreased methylation of PIWIL1 promoter | 27989131 |
D004997 | Ethinyl Estradiol | Ethinyl Estradiol results in increased expression of PIWIL1 mRNA | 20227414 |
D004997 | Ethinyl Estradiol | [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of PIWIL1 mRNA | 17942748 |
C561695 | (+)-JQ1 compound | (+)-JQ1 compound results in decreased expression of PIWIL1 mRNA | 26752646 |
C101814 | perfluoro-n-undecanoic acid | perfluoro-n-undecanoic acid results in increased expression of PIWIL1 mRNA | 23602845 |
C005556 | propionaldehyde | propionaldehyde results in increased expression of PIWIL1 mRNA | 26079696 |
D013749 | Tetrachlorodibenzodioxin | [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of PIWIL1 mRNA | 17942748 |
C012589 | trichostatin A | trichostatin A results in increased expression of PIWIL1 mRNA | 15901671 |
C016805 | tris(1,3-dichloro-2-propyl)phosphate | "tris(1,3-dichloro-2-propyl)phosphate results in decreased expression of PIWIL1 mRNA" | 26743178 |
D014415 | Tunicamycin | Tunicamycin results in increased expression of PIWIL1 mRNA | 22378314 |
D014635 | Valproic Acid | Valproic Acid results in increased expression of PIWIL1 mRNA | 15901671 |
D014635 | Valproic Acid | Valproic Acid results in increased methylation of PIWIL1 gene | 29154799 |
GO ID | GO Term | Qualifier | Evidence | PubMed |
---|---|---|---|---|
GO:0003727 | single-stranded RNA binding | - | IEA | - |
GO:0003729 | mRNA binding | - | ISS | - |
GO:0004521 | endoribonuclease activity | - | ISS | - |
GO:0005515 | protein binding | - | IPI | 14749716 20937909 |
GO:0019901 | protein kinase binding | - | IEA | - |
GO:0034584 | piRNA binding | - | IDA | 28552346 |
GO:0046872 | metal ion binding | - | IEA | - |
GO ID | GO Term | Qualifier | Evidence | PubMed |
---|---|---|---|---|
GO:0006417 | regulation of translation | - | IEA | - |
GO:0007275 | multicellular organism development | - | IEA | - |
GO:0007283 | spermatogenesis | - | ISS | - |
GO:0007286 | spermatid development | - | IMP | 28552346 |
GO:0007286 | spermatid development | - | ISS | - |
GO:0010529 | negative regulation of transposition | - | ISS | - |
GO:0031047 | gene silencing by RNA | - | ISS | - |
GO:0034587 | piRNA metabolic process | - | ISS | - |
GO:0035093 | spermatogenesis, exchange of chromosomal proteins | - | ISS | - |
GO:0051321 | meiotic cell cycle | - | IEA | - |
GO:0090502 | RNA phosphodiester bond hydrolysis, endonucleolytic | - | IEA | - |
GO ID | GO Term | Qualifier | Evidence | PubMed |
---|---|---|---|---|
GO:0005634 | nucleus | - | IEA | - |
GO:0005737 | cytoplasm | - | ISS | - |
GO:0005844 | polysome | - | IEA | - |
GO:0005845 | mRNA cap binding complex | - | IEA | - |
GO:0033391 | chromatoid body | - | ISS | - |
GO:0043186 | P granule | - | ISS | - |
GO:0097433 | dense body | - | IEA | - |
KEGG ID | KEGG Term |
---|---|
hsa04320 | Dorso-ventral axis formation |
Reactome ID | Reactome Term | Evidence |
---|---|---|
R-HSA-211000 | Gene Silencing by RNA | IEA |
R-HSA-5601884 | PIWI-interacting RNA (piRNA) biogenesis | IEA |
R-HSA-74160 | Gene expression (Transcription) | IEA |
PMID | Title (Year) | Author | Journal |
---|---|---|---|
27539334 | [Association between genetic variants in microRNA biosynthesis genes and the risk of head and neck squamous cell carcinoma]. (2016 Aug 10) | Yuan WW | Zhonghua Liu Xing Bing Xue Za Zhi |
28109471 | Smoking status regulates a novel panel of PIWI-interacting RNAs in head and neck squamous cell carcinoma. (2017 Feb) | Krishnan AR | Oral Oncol |