SNP Detail Info-rs10009538

Organism: Homo sapiens

Alleles: C>A / C>T

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

T=0014 (444/29948,GnomAD)
T=0021 (622/29118,TOPMED)
T=0020 (101/5008,1000G)
T=0000 (1/3854,ALSPAC)
T=0000 (0/3708,TWINSUK)

Position: chr4:184971361 (GRCh38.p7) (4q35.1)

Phenotype: AD

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 3 Enhancers around

Promoter: 0 Promoter around

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	C=0.930	T=0.070
1000Genomes	American	Sub	694	C=0.990	T=0.010
1000Genomes	East Asian	Sub	1008	C=1.000	T=0.000
1000Genomes	Europe	Sub	1006	C=0.999	T=0.001
1000Genomes	Global	Study-wide	5008	C=0.980	T=0.020
1000Genomes	South Asian	Sub	978	C=1.000	T=0.000
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	C=1.000	T=0.000
The Genome Aggregation Database	African	Sub	8714	C=0.950	T=0.050
The Genome Aggregation Database	American	Sub	838	C=1.000	T=0.000
The Genome Aggregation Database	East Asian	Sub	1620	C=1.000	T=0.000
The Genome Aggregation Database	Europe	Sub	18474	C=0.999	T=0.000
The Genome Aggregation Database	Global	Study-wide	29948	C=0.985	T=0.014
The Genome Aggregation Database	Other	Sub	302	C=1.000	T=0.000
Trans-Omics for Precision Medicine	Global	Study-wide	29118	C=0.978	T=0.021
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	C=1.000	T=0.000

Chromosome	Start	End	Region	Distance ( -/+ : Up/Downstream )
chr4	98136473	98137210	E071	49154
chr4	98136473	98137210	E072	49154
chr4	98136473	98137210	E082	49154

rs10009538