SNP Detail Info-rs10043150

Organism: Homo sapiens

Alleles: C>A

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

A=0169 (5071/29952,GnomAD)
A=0174 (5069/29118,TOPMED)
A=0174 (870/5008,1000G)
A=0174 (672/3854,ALSPAC)
A=0161 (597/3708,TWINSUK)

Position: chr5:156969464 (GRCh38.p7) (5q33.3)

Phenotype: AD

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 0 Enhancer around

Promoter: 0 Promoter around

Sequence Name	Change(s)
GRCh38.p7 chr 5	NC_000005.10:g.156969464C>A
GRCh37.p13 chr 5	NC_000005.9:g.156396475C>A

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	C=0.769	A=0.231
1000Genomes	American	Sub	694	C=0.850	A=0.150
1000Genomes	East Asian	Sub	1008	C=0.842	A=0.158
1000Genomes	Europe	Sub	1006	C=0.847	A=0.153
1000Genomes	Global	Study-wide	5008	C=0.826	A=0.174
1000Genomes	South Asian	Sub	978	C=0.850	A=0.150
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	C=0.826	A=0.174
The Genome Aggregation Database	African	Sub	8718	C=0.810	A=0.190
The Genome Aggregation Database	American	Sub	836	C=0.900	A=0.100
The Genome Aggregation Database	East Asian	Sub	1622	C=0.861	A=0.139
The Genome Aggregation Database	Europe	Sub	18474	C=0.835	A=0.164
The Genome Aggregation Database	Global	Study-wide	29952	C=0.830	A=0.169
The Genome Aggregation Database	Other	Sub	302	C=0.790	A=0.210
Trans-Omics for Precision Medicine	Global	Study-wide	29118	C=0.825	A=0.174
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	C=0.839	A=0.161

PMID	Title	Author	Journal
23743675	A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.	Kapoor M	Hum Genet

SNP ID	p-value	Traits	Study
rs10043150	1.26E-05	alcohol consumption	23743675

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

rs10043150