SNP Detail Info-rs10052295

Molecule type	Change	Amino acid[Codon]	SO Term
CTNND2 transcript variant 2	NM_001288715.1:c.	N/A	Intron Variant
CTNND2 transcript variant 3	NM_001288716.1:c.	N/A	Intron Variant
CTNND2 transcript variant 4	NM_001288717.1:c.	N/A	Intron Variant
CTNND2 transcript variant 1	NM_001332.3:c.	N/A	Intron Variant
CTNND2 transcript variant 5	NR_109988.1:n.	N/A	Intron Variant
CTNND2 transcript variant X1	XM_005248251.3:c.	N/A	Intron Variant
CTNND2 transcript variant X2	XM_005248252.2:c.	N/A	Intron Variant
CTNND2 transcript variant X3	XM_005248253.1:c.	N/A	Intron Variant
CTNND2 transcript variant X4	XM_011513967.2:c.	N/A	Intron Variant
CTNND2 transcript variant X5	XM_017009072.1:c.	N/A	Intron Variant
CTNND2 transcript variant X6	XM_017009073.1:c.	N/A	Intron Variant
CTNND2 transcript variant X7	XM_017009074.1:c.	N/A	Intron Variant
CTNND2 transcript variant X8	XM_017009075.1:c.	N/A	Intron Variant
CTNND2 transcript variant X9	XM_017009076.1:c.	N/A	Intron Variant

Molecule type	Change	Amino acid[Codon]	SO Term
LOC105374654 transcript	XR_925791.2:n.	N/A	Intron Variant

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	A=0.522	G=0.478
1000Genomes	American	Sub	694	A=0.790	G=0.210
1000Genomes	East Asian	Sub	1008	A=0.784	G=0.216
1000Genomes	Europe	Sub	1006	A=0.751	G=0.249
1000Genomes	Global	Study-wide	5008	A=0.728	G=0.272
1000Genomes	South Asian	Sub	978	A=0.890	G=0.110
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	A=0.745	G=0.255
The Genome Aggregation Database	African	Sub	8708	A=0.573	G=0.427
The Genome Aggregation Database	American	Sub	838	A=0.820	G=0.180
The Genome Aggregation Database	East Asian	Sub	1616	A=0.753	G=0.247
The Genome Aggregation Database	Europe	Sub	18474	A=0.752	G=0.247
The Genome Aggregation Database	Global	Study-wide	29938	A=0.701	G=0.298
The Genome Aggregation Database	Other	Sub	302	A=0.690	G=0.310
Trans-Omics for Precision Medicine	Global	Study-wide	29118	A=0.664	G=0.336
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	A=0.737	G=0.263

PMID	Title	Author	Journal
23183491	Genome-wide association study identifies a potent locus associated with human opioid sensitivity.	Nishizawa D	Mol Psychiatry

SNP ID	p-value	Traits	Study
rs10052295	0.000162	Opioid sensitivity	23183491

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

Chromosome	Start	End	Region	Distance ( -/+ : Up/Downstream )
chr5	10988081	10988335	E067	10759
chr5	10988370	10988464	E067	11048
chr5	10988821	10990667	E067	11499
chr5	11007507	11007788	E067	30185
chr5	11007875	11007929	E067	30553
chr5	10986891	10987067	E068	9569
chr5	10987198	10987313	E068	9876
chr5	10987531	10987620	E068	10209
chr5	10988081	10988335	E068	10759
chr5	10988370	10988464	E068	11048
chr5	10988821	10990667	E068	11499
chr5	11007507	11007788	E068	30185
chr5	11007875	11007929	E068	30553
chr5	11008073	11008177	E068	30751
chr5	10988081	10988335	E069	10759
chr5	10988370	10988464	E069	11048
chr5	10988821	10990667	E069	11499
chr5	10988081	10988335	E071	10759
chr5	10988370	10988464	E071	11048
chr5	10988821	10990667	E071	11499
chr5	11010167	11010217	E071	32845
chr5	11010686	11010756	E071	33364
chr5	11010817	11011272	E071	33495
chr5	10982928	10982993	E072	5606
chr5	10984172	10984226	E072	6850
chr5	10984289	10984381	E072	6967
chr5	10988081	10988335	E072	10759
chr5	10988370	10988464	E072	11048
chr5	10988821	10990667	E072	11499
chr5	10988370	10988464	E073	11048
chr5	10988821	10990667	E073	11499
chr5	11023505	11023760	E073	46183
chr5	10982928	10982993	E074	5606
chr5	10988081	10988335	E074	10759
chr5	10988370	10988464	E074	11048
chr5	10988821	10990667	E074	11499
chr5	11007507	11007788	E074	30185
chr5	11007875	11007929	E074	30553
chr5	11008073	11008177	E074	30751
chr5	10934262	10934333	E081	-42989
chr5	10934981	10935024	E081	-42298
chr5	10984172	10984226	E081	6850
chr5	10984289	10984381	E081	6967
chr5	10984476	10984516	E081	7154
chr5	10984541	10984683	E081	7219
chr5	10988081	10988335	E081	10759
chr5	10988370	10988464	E081	11048
chr5	11023971	11024489	E082	46649

rs10052295