Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 8 | NC_000008.11:g.81793229A>G |
GRCh37.p13 chr 8 | NC_000008.10:g.82705464A>G |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | A=0.161 | G=0.839 |
1000Genomes | American | Sub | 694 | A=0.360 | G=0.640 |
1000Genomes | East Asian | Sub | 1008 | A=0.549 | G=0.451 |
1000Genomes | Europe | Sub | 1006 | A=0.339 | G=0.661 |
1000Genomes | Global | Study-wide | 5008 | A=0.333 | G=0.667 |
1000Genomes | South Asian | Sub | 978 | A=0.320 | G=0.680 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | A=0.337 | G=0.663 |
The Genome Aggregation Database | African | Sub | 8696 | A=0.182 | G=0.818 |
The Genome Aggregation Database | American | Sub | 834 | A=0.320 | G=0.680 |
The Genome Aggregation Database | East Asian | Sub | 1610 | A=0.576 | G=0.424 |
The Genome Aggregation Database | Europe | Sub | 18458 | A=0.316 | G=0.684 |
The Genome Aggregation Database | Global | Study-wide | 29900 | A=0.291 | G=0.708 |
The Genome Aggregation Database | Other | Sub | 302 | A=0.380 | G=0.620 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | A=0.279 | G=0.721 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | A=0.330 | G=0.670 |
PMID | Title | Author | Journal |
---|---|---|---|
23743675 | A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks. | Kapoor M | Hum Genet |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs10091077 | 5.34E-05 | alcohol consumption | 23743675 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value |
---|---|---|---|---|
cg17211192 | chr8:82754475 | SNX16 | 0.0617774413524121 | 3.4532e-23 |
cg23324259 | chr8:82754387 | SNX16 | 0.0187834224673758 | 9.6486e-16 |
cg27398817 | chr8:82754497 | SNX16 | 0.037908038583195 | 1.3218e-14 |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr8 | 82726921 | 82727044 | E067 | 21457 |
chr8 | 82727084 | 82727145 | E067 | 21620 |
chr8 | 82727397 | 82727713 | E067 | 21933 |
chr8 | 82751415 | 82751459 | E067 | 45951 |
chr8 | 82751551 | 82751632 | E067 | 46087 |
chr8 | 82751693 | 82751743 | E067 | 46229 |
chr8 | 82751769 | 82751905 | E067 | 46305 |
chr8 | 82751920 | 82751978 | E067 | 46456 |
chr8 | 82752051 | 82752101 | E067 | 46587 |
chr8 | 82752136 | 82752286 | E067 | 46672 |
chr8 | 82752424 | 82752500 | E067 | 46960 |
chr8 | 82752523 | 82752586 | E067 | 47059 |
chr8 | 82749135 | 82749745 | E068 | 43671 |
chr8 | 82750403 | 82750493 | E068 | 44939 |
chr8 | 82750557 | 82750622 | E068 | 45093 |
chr8 | 82750733 | 82750913 | E068 | 45269 |
chr8 | 82751186 | 82751259 | E068 | 45722 |
chr8 | 82751415 | 82751459 | E068 | 45951 |
chr8 | 82751551 | 82751632 | E068 | 46087 |
chr8 | 82751693 | 82751743 | E068 | 46229 |
chr8 | 82752424 | 82752500 | E068 | 46960 |
chr8 | 82752523 | 82752586 | E068 | 47059 |
chr8 | 82752648 | 82752702 | E068 | 47184 |
chr8 | 82752051 | 82752101 | E069 | 46587 |
chr8 | 82752136 | 82752286 | E069 | 46672 |
chr8 | 82752424 | 82752500 | E069 | 46960 |
chr8 | 82752523 | 82752586 | E069 | 47059 |
chr8 | 82752648 | 82752702 | E069 | 47184 |
chr8 | 82708766 | 82709232 | E070 | 3302 |
chr8 | 82709275 | 82709325 | E070 | 3811 |
chr8 | 82709354 | 82709440 | E070 | 3890 |
chr8 | 82736359 | 82736422 | E070 | 30895 |
chr8 | 82737606 | 82737656 | E070 | 32142 |
chr8 | 82737704 | 82737783 | E070 | 32240 |
chr8 | 82749135 | 82749745 | E070 | 43671 |
chr8 | 82726921 | 82727044 | E071 | 21457 |
chr8 | 82727397 | 82727713 | E071 | 21933 |
chr8 | 82750403 | 82750493 | E071 | 44939 |
chr8 | 82750557 | 82750622 | E071 | 45093 |
chr8 | 82750733 | 82750913 | E071 | 45269 |
chr8 | 82751769 | 82751905 | E071 | 46305 |
chr8 | 82751920 | 82751978 | E071 | 46456 |
chr8 | 82752051 | 82752101 | E071 | 46587 |
chr8 | 82752136 | 82752286 | E071 | 46672 |
chr8 | 82752424 | 82752500 | E071 | 46960 |
chr8 | 82752523 | 82752586 | E071 | 47059 |
chr8 | 82752648 | 82752702 | E071 | 47184 |
chr8 | 82692684 | 82693377 | E072 | -12087 |
chr8 | 82726294 | 82726439 | E072 | 20830 |
chr8 | 82726921 | 82727044 | E072 | 21457 |
chr8 | 82727084 | 82727145 | E072 | 21620 |
chr8 | 82727397 | 82727713 | E072 | 21933 |
chr8 | 82727397 | 82727713 | E073 | 21933 |
chr8 | 82726921 | 82727044 | E074 | 21457 |
chr8 | 82750403 | 82750493 | E074 | 44939 |
chr8 | 82750557 | 82750622 | E074 | 45093 |
chr8 | 82750733 | 82750913 | E074 | 45269 |
chr8 | 82751186 | 82751259 | E074 | 45722 |
chr8 | 82751415 | 82751459 | E074 | 45951 |
chr8 | 82751551 | 82751632 | E074 | 46087 |
chr8 | 82751693 | 82751743 | E074 | 46229 |
chr8 | 82751769 | 82751905 | E074 | 46305 |
chr8 | 82751920 | 82751978 | E074 | 46456 |
chr8 | 82752051 | 82752101 | E074 | 46587 |
chr8 | 82752136 | 82752286 | E074 | 46672 |
chr8 | 82752424 | 82752500 | E074 | 46960 |
chr8 | 82752523 | 82752586 | E074 | 47059 |
chr8 | 82752648 | 82752702 | E074 | 47184 |
chr8 | 82692684 | 82693377 | E081 | -12087 |
chr8 | 82748941 | 82748991 | E081 | 43477 |
chr8 | 82751186 | 82751259 | E081 | 45722 |
chr8 | 82751415 | 82751459 | E081 | 45951 |
chr8 | 82751551 | 82751632 | E081 | 46087 |
chr8 | 82751693 | 82751743 | E081 | 46229 |
chr8 | 82751769 | 82751905 | E081 | 46305 |
chr8 | 82751920 | 82751978 | E081 | 46456 |
chr8 | 82752051 | 82752101 | E081 | 46587 |
chr8 | 82752136 | 82752286 | E081 | 46672 |
chr8 | 82752424 | 82752500 | E081 | 46960 |
chr8 | 82752523 | 82752586 | E081 | 47059 |
chr8 | 82752648 | 82752702 | E081 | 47184 |
chr8 | 82699393 | 82699447 | E082 | -6017 |
chr8 | 82699579 | 82699654 | E082 | -5810 |
chr8 | 82749135 | 82749745 | E082 | 43671 |
chr8 | 82749825 | 82749873 | E082 | 44361 |
chr8 | 82751551 | 82751632 | E082 | 46087 |
chr8 | 82751693 | 82751743 | E082 | 46229 |
chr8 | 82751769 | 82751905 | E082 | 46305 |
chr8 | 82751920 | 82751978 | E082 | 46456 |
chr8 | 82752051 | 82752101 | E082 | 46587 |
chr8 | 82752136 | 82752286 | E082 | 46672 |
chr8 | 82752424 | 82752500 | E082 | 46960 |
chr8 | 82752523 | 82752586 | E082 | 47059 |
Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
---|---|---|---|---|
chr8 | 82752902 | 82753069 | E067 | 47438 |
chr8 | 82753140 | 82753307 | E067 | 47676 |
chr8 | 82753499 | 82753591 | E067 | 48035 |
chr8 | 82753602 | 82754599 | E067 | 48138 |
chr8 | 82753499 | 82753591 | E068 | 48035 |
chr8 | 82753602 | 82754599 | E068 | 48138 |
chr8 | 82752902 | 82753069 | E069 | 47438 |
chr8 | 82753140 | 82753307 | E069 | 47676 |
chr8 | 82753499 | 82753591 | E069 | 48035 |
chr8 | 82753602 | 82754599 | E069 | 48138 |
chr8 | 82752902 | 82753069 | E070 | 47438 |
chr8 | 82753140 | 82753307 | E070 | 47676 |
chr8 | 82753499 | 82753591 | E070 | 48035 |
chr8 | 82753602 | 82754599 | E070 | 48138 |
chr8 | 82752902 | 82753069 | E071 | 47438 |
chr8 | 82753140 | 82753307 | E071 | 47676 |
chr8 | 82753499 | 82753591 | E071 | 48035 |
chr8 | 82753602 | 82754599 | E071 | 48138 |
chr8 | 82752902 | 82753069 | E072 | 47438 |
chr8 | 82753140 | 82753307 | E072 | 47676 |
chr8 | 82753499 | 82753591 | E072 | 48035 |
chr8 | 82753602 | 82754599 | E072 | 48138 |
chr8 | 82752902 | 82753069 | E073 | 47438 |
chr8 | 82753140 | 82753307 | E073 | 47676 |
chr8 | 82753499 | 82753591 | E073 | 48035 |
chr8 | 82753602 | 82754599 | E073 | 48138 |
chr8 | 82753140 | 82753307 | E074 | 47676 |
chr8 | 82753499 | 82753591 | E074 | 48035 |
chr8 | 82753602 | 82754599 | E074 | 48138 |
chr8 | 82753602 | 82754599 | E081 | 48138 |
chr8 | 82752902 | 82753069 | E082 | 47438 |
chr8 | 82753140 | 82753307 | E082 | 47676 |
chr8 | 82753499 | 82753591 | E082 | 48035 |
chr8 | 82753602 | 82754599 | E082 | 48138 |