rs10161408

Homo sapiens
T>C
ADIPOR2 : Intron Variant
Check p-value
SNV (Single Nucleotide Variation)
C=0012 (386/29962,GnomAD)
C=0017 (513/29118,TOPMED)
C=0013 (63/5008,1000G)
chr12:1779507 (GRCh38.p7) (12p13.33)
AD
GWASdb2
1   publication(s)
See rs on genome
7 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 12NC_000012.12:g.1779507T>C
GRCh37.p13 chr 12NC_000012.11:g.1888673T>C

Gene: ADIPOR2, adiponectin receptor 2(plus strand)

Molecule type Change Amino acid[Codon] SO Term
ADIPOR2 transcriptNM_024551.2:c.N/AIntron Variant
ADIPOR2 transcript variant X1XM_005253789.1:c.N/AIntron Variant
ADIPOR2 transcript variant X3XM_006719018.2:c.N/AIntron Variant
ADIPOR2 transcript variant X2XM_011521024.2:c.N/AIntron Variant

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.953C=0.047
1000GenomesAmericanSub694T=1.000C=0.000
1000GenomesEast AsianSub1008T=1.000C=0.000
1000GenomesEuropeSub1006T=1.000C=0.000
1000GenomesGlobalStudy-wide5008T=0.987C=0.013
1000GenomesSouth AsianSub978T=1.000C=0.000
The Genome Aggregation DatabaseAfricanSub8708T=0.956C=0.044
The Genome Aggregation DatabaseAmericanSub838T=1.000C=0.000
The Genome Aggregation DatabaseEast AsianSub1622T=1.000C=0.000
The Genome Aggregation DatabaseEuropeSub18492T=0.999C=0.000
The Genome Aggregation DatabaseGlobalStudy-wide29962T=0.987C=0.012
The Genome Aggregation DatabaseOtherSub302T=1.000C=0.000
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.982C=0.017
PMID Title Author Journal
21314694Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample.Kendler KSAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs101614080.00018alcohol dependence21314694

eQTL of rs10161408 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs10161408 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr1218413731841809E067-46864
chr1218515341851699E067-36974
chr1218517091851799E067-36874
chr1218553191855363E067-33310
chr1218558891855953E067-32720
chr1218617151861782E067-26891
chr1218622951862519E067-26154
chr1218664261866476E067-22197
chr1218665781866638E067-22035
chr1218666921866757E067-21916
chr1218668611866915E067-21758
chr1218669431867065E067-21608
chr1218671871867927E067-20746
chr1218680831868413E067-20260
chr1218684171868734E067-19939
chr1218689921869108E067-19565
chr1218695561869821E067-18852
chr1218707591870813E067-17860
chr1218711971871330E067-17343
chr1218720621872122E067-16551
chr1218752331875317E067-13356
chr1218753191875430E067-13243
chr1218768011876873E067-11800
chr1218769871877088E067-11585
chr1218771021877444E067-11229
chr1218777191877793E067-10880
chr1218779201878064E067-10609
chr1218782741878578E067-10095
chr1218811171881202E067-7471
chr1218814491881489E067-7184
chr1218819021882161E067-6512
chr1218821981882283E067-6390
chr1218825081882653E067-6020
chr1218830481883745E067-4928
chr1218837531883863E067-4810
chr1218843181884469E067-4204
chr1218845091884569E067-4104
chr1218846651884853E067-3820
chr1218849331885033E067-3640
chr1218851801885280E067-3393
chr1218853161886193E067-2480
chr1218869461887305E067-1368
chr1218878091887859E067-814
chr1218881271888395E067-278
chr1218885651888627E067-46
chr1218887821888850E067109
chr1218889571889298E067284
chr1218896581889702E067985
chr1218904571890572E0671784
chr1218907731891428E0672100
chr1218915391891605E0672866
chr1218970321897145E0678359
chr1218971551897236E0678482
chr1218972811897331E0678608
chr1218975071897600E0678834
chr1218995671900061E06710894
chr1219000671901183E06711394
chr1219288051928901E06740132
chr1218413731841809E068-46864
chr1218419921842500E068-46173
chr1218465501846639E068-42034
chr1218466431846730E068-41943
chr1218469821847035E068-41638
chr1218471731847233E068-41440
chr1218515341851699E068-36974
chr1218517091851799E068-36874
chr1218526701852740E068-35933
chr1218665781866638E068-22035
chr1218666921866757E068-21916
chr1218668611866915E068-21758
chr1218669431867065E068-21608
chr1218671871867927E068-20746
chr1218684171868734E068-19939
chr1218689921869108E068-19565
chr1218695561869821E068-18852
chr1218698271870195E068-18478
chr1218702111870511E068-18162
chr1218707591870813E068-17860
chr1218711971871330E068-17343
chr1218752331875317E068-13356
chr1218753191875430E068-13243
chr1218755391875594E068-13079
chr1218768011876873E068-11800
chr1218769871877088E068-11585
chr1218803741880424E068-8249
chr1218811171881202E068-7471
chr1218814491881489E068-7184
chr1218819021882161E068-6512
chr1218821981882283E068-6390
chr1218825081882653E068-6020
chr1218830481883745E068-4928
chr1218837531883863E068-4810
chr1218843181884469E068-4204
chr1218845091884569E068-4104
chr1218846651884853E068-3820
chr1218849331885033E068-3640
chr1218851801885280E068-3393
chr1218853161886193E068-2480
chr1218869461887305E068-1368
chr1218878091887859E068-814
chr1218881271888395E068-278
chr1218885651888627E068-46
chr1218887821888850E068109
chr1218889571889298E068284
chr1218896581889702E068985
chr1218904571890572E0681784
chr1218907731891428E0682100
chr1218915391891605E0682866
chr1218931921893360E0684519
chr1218970321897145E0688359
chr1218971551897236E0688482
chr1218972811897331E0688608
chr1218975071897600E0688834
chr1218976071897668E0688934
chr1218979001897986E0689227
chr1218995671900061E06810894
chr1219000671901183E06811394
chr1219039761904183E06815303
chr1219042181904699E06815545
chr1219371281937201E06848455
chr1218386981838755E069-49918
chr1218398431839893E069-48780
chr1218403121840379E069-48294
chr1218410381841082E069-47591
chr1218413731841809E069-46864
chr1218419921842500E069-46173
chr1218465501846639E069-42034
chr1218466431846730E069-41943
chr1218469821847035E069-41638
chr1218471731847233E069-41440
chr1218511741851419E069-37254
chr1218515341851699E069-36974
chr1218517091851799E069-36874
chr1218617151861782E069-26891
chr1218622951862519E069-26154
chr1218664261866476E069-22197
chr1218665781866638E069-22035
chr1218666921866757E069-21916
chr1218668611866915E069-21758
chr1218669431867065E069-21608
chr1218671871867927E069-20746
chr1218680831868413E069-20260
chr1218684171868734E069-19939
chr1218689921869108E069-19565
chr1218695561869821E069-18852
chr1218698271870195E069-18478
chr1218702111870511E069-18162
chr1218707591870813E069-17860
chr1218711971871330E069-17343
chr1218744311874471E069-14202
chr1218752331875317E069-13356
chr1218753191875430E069-13243
chr1218755391875594E069-13079
chr1218768011876873E069-11800
chr1218769871877088E069-11585
chr1218771021877444E069-11229
chr1218793071879491E069-9182
chr1218803741880424E069-8249
chr1218811171881202E069-7471
chr1218814491881489E069-7184
chr1218819021882161E069-6512
chr1218821981882283E069-6390
chr1218825081882653E069-6020
chr1218830481883745E069-4928
chr1218837531883863E069-4810
chr1218843181884469E069-4204
chr1218845091884569E069-4104
chr1218846651884853E069-3820
chr1218849331885033E069-3640
chr1218851801885280E069-3393
chr1218853161886193E069-2480
chr1218869461887305E069-1368
chr1218878091887859E069-814
chr1218881271888395E069-278
chr1218885651888627E069-46
chr1218887821888850E069109
chr1218889571889298E069284
chr1218896581889702E069985
chr1218907731891428E0692100
chr1218915391891605E0692866
chr1218931921893360E0694519
chr1218970321897145E0698359
chr1218971551897236E0698482
chr1218972811897331E0698608
chr1218975071897600E0698834
chr1218976071897668E0698934
chr1218979001897986E0699227
chr1218995671900061E06910894
chr1219000671901183E06911394
chr1219042181904699E06915545
chr1219135191914219E06924846
chr1219286261928718E06939953
chr1219288051928901E06940132
chr1219289991929173E06940326
chr1218830481883745E070-4928
chr1218837531883863E070-4810
chr1218887821888850E070109
chr1218889571889298E070284
chr1219097201910456E07021047
chr1219142491914750E07025576
chr1219289991929173E07040326
chr1219310351931436E07042362
chr1219314391931489E07042766
chr1219361171936197E07047444
chr1218410381841082E071-47591
chr1218413731841809E071-46864
chr1218419921842500E071-46173
chr1218465501846639E071-42034
chr1218466431846730E071-41943
chr1218469821847035E071-41638
chr1218471731847233E071-41440
chr1218493611850276E071-38397
chr1218504371850487E071-38186
chr1218506091850683E071-37990
chr1218506891850783E071-37890
chr1218508071850957E071-37716
chr1218509671851063E071-37610
chr1218511741851419E071-37254
chr1218515341851699E071-36974
chr1218517091851799E071-36874
chr1218523271852377E071-36296
chr1218526701852740E071-35933
chr1218541771854554E071-34119
chr1218553191855363E071-33310
chr1218622951862519E071-26154
chr1218662431866301E071-22372
chr1218664261866476E071-22197
chr1218665781866638E071-22035
chr1218666921866757E071-21916
chr1218668611866915E071-21758
chr1218669431867065E071-21608
chr1218671871867927E071-20746
chr1218680831868413E071-20260
chr1218684171868734E071-19939
chr1218689921869108E071-19565
chr1218695561869821E071-18852
chr1218698271870195E071-18478
chr1218702111870511E071-18162
chr1218707591870813E071-17860
chr1218711971871330E071-17343
chr1218720621872122E071-16551
chr1218744311874471E071-14202
chr1218752331875317E071-13356
chr1218753191875430E071-13243
chr1218755391875594E071-13079
chr1218768011876873E071-11800
chr1218769871877088E071-11585
chr1218771021877444E071-11229
chr1218777191877793E071-10880
chr1218779201878064E071-10609
chr1218782741878578E071-10095
chr1218788031878873E071-9800
chr1218789631879045E071-9628
chr1218791091879250E071-9423
chr1218793071879491E071-9182
chr1218803741880424E071-8249
chr1218811171881202E071-7471
chr1218814491881489E071-7184
chr1218819021882161E071-6512
chr1218821981882283E071-6390
chr1218825081882653E071-6020
chr1218843181884469E071-4204
chr1218845091884569E071-4104
chr1218846651884853E071-3820
chr1218849331885033E071-3640
chr1218851801885280E071-3393
chr1218853161886193E071-2480
chr1218869461887305E071-1368
chr1218878091887859E071-814
chr1218881271888395E071-278
chr1218896581889702E071985
chr1218904571890572E0711784
chr1218907731891428E0712100
chr1218915391891605E0712866
chr1218931921893360E0714519
chr1218963631896433E0717690
chr1218966561896746E0717983
chr1218967771896827E0718104
chr1218970321897145E0718359
chr1218971551897236E0718482
chr1218972811897331E0718608
chr1218975071897600E0718834
chr1218976071897668E0718934
chr1218979001897986E0719227
chr1218995671900061E07110894
chr1219000671901183E07111394
chr1219042181904699E07115545
chr1219135191914219E07124846
chr1219142491914750E07125576
chr1219228841922934E07134211
chr1219288051928901E07140132
chr1219289991929173E07140326
chr1219338541933953E07145181
chr1218386981838755E072-49918
chr1218403121840379E072-48294
chr1218410381841082E072-47591
chr1218413731841809E072-46864
chr1218419921842500E072-46173
chr1218465501846639E072-42034
chr1218466431846730E072-41943
chr1218469821847035E072-41638
chr1218471731847233E072-41440
chr1218523271852377E072-36296
chr1218526701852740E072-35933
chr1218622951862519E072-26154
chr1218665781866638E072-22035
chr1218666921866757E072-21916
chr1218668611866915E072-21758
chr1218669431867065E072-21608
chr1218671871867927E072-20746
chr1218680831868413E072-20260
chr1218684171868734E072-19939
chr1218695561869821E072-18852
chr1218698271870195E072-18478
chr1218702111870511E072-18162
chr1218707591870813E072-17860
chr1218711971871330E072-17343
chr1218768011876873E072-11800
chr1218769871877088E072-11585
chr1218771021877444E072-11229
chr1218777191877793E072-10880
chr1218779201878064E072-10609
chr1218782741878578E072-10095
chr1218788031878873E072-9800
chr1218789631879045E072-9628
chr1218791091879250E072-9423
chr1218793071879491E072-9182
chr1218819021882161E072-6512
chr1218821981882283E072-6390
chr1218825081882653E072-6020
chr1218830481883745E072-4928
chr1218843181884469E072-4204
chr1218845091884569E072-4104
chr1218846651884853E072-3820
chr1218849331885033E072-3640
chr1218851801885280E072-3393
chr1218853161886193E072-2480
chr1218869461887305E072-1368
chr1218878091887859E072-814
chr1218881271888395E072-278
chr1218885651888627E072-46
chr1218887821888850E072109
chr1218889571889298E072284
chr1218904571890572E0721784
chr1218907731891428E0722100
chr1218915391891605E0722866
chr1218931921893360E0724519
chr1218938201893864E0725147
chr1218958591896039E0727186
chr1218960561896137E0727383
chr1218961581896254E0727485
chr1218963631896433E0727690
chr1218966561896746E0727983
chr1218967771896827E0728104
chr1218970321897145E0728359
chr1218971551897236E0728482
chr1218972811897331E0728608
chr1218975071897600E0728834
chr1218995671900061E07210894
chr1219000671901183E07211394
chr1219042181904699E07215545
chr1219135191914219E07224846
chr1219286261928718E07239953
chr1219288051928901E07240132
chr1219289991929173E07240326
chr1219338541933953E07245181
chr1219341891934239E07245516
chr1219342601934347E07245587
chr1218465501846639E073-42034
chr1218466431846730E073-41943
chr1218469821847035E073-41638
chr1218471731847233E073-41440
chr1218684171868734E073-19939
chr1218689921869108E073-19565
chr1218753191875430E073-13243
chr1218755391875594E073-13079
chr1218768011876873E073-11800
chr1218769871877088E073-11585
chr1218771021877444E073-11229
chr1218777191877793E073-10880
chr1218779201878064E073-10609
chr1218782741878578E073-10095
chr1218821981882283E073-6390
chr1218837531883863E073-4810
chr1218843181884469E073-4204
chr1218845091884569E073-4104
chr1218846651884853E073-3820
chr1218849331885033E073-3640
chr1218851801885280E073-3393
chr1218853161886193E073-2480
chr1218885651888627E073-46
chr1218887821888850E073109
chr1218889571889298E073284
chr1218896581889702E073985
chr1218904571890572E0731784
chr1218907731891428E0732100
chr1218915391891605E0732866
chr1218931921893360E0734519
chr1218944251894475E0735752
chr1218944771894628E0735804
chr1218946511895003E0735978
chr1218970321897145E0738359
chr1218971551897236E0738482
chr1218972811897331E0738608
chr1218975071897600E0738834
chr1218995671900061E07310894
chr1219000671901183E07311394
chr1219286261928718E07339953
chr1219288051928901E07340132
chr1219289991929173E07340326
chr1219338541933953E07345181
chr1219341891934239E07345516
chr1219342601934347E07345587
chr1219346121934662E07345939
chr1218386981838755E074-49918
chr1218403121840379E074-48294
chr1218410381841082E074-47591
chr1218413731841809E074-46864
chr1218419921842500E074-46173
chr1218465501846639E074-42034
chr1218466431846730E074-41943
chr1218469821847035E074-41638
chr1218471731847233E074-41440
chr1218472451847295E074-41378
chr1218472971847337E074-41336
chr1218474601847563E074-41110
chr1218475761847631E074-41042
chr1218476501847864E074-40809
chr1218479041848018E074-40655
chr1218483721848423E074-40250
chr1218484721848555E074-40118
chr1218493611850276E074-38397
chr1218504371850487E074-38186
chr1218506091850683E074-37990
chr1218506891850783E074-37890
chr1218508071850957E074-37716
chr1218509671851063E074-37610
chr1218511741851419E074-37254
chr1218515341851699E074-36974
chr1218517091851799E074-36874
chr1218523271852377E074-36296
chr1218541771854554E074-34119
chr1218583831858502E074-30171
chr1218622951862519E074-26154
chr1218662431866301E074-22372
chr1218664261866476E074-22197
chr1218665781866638E074-22035
chr1218666921866757E074-21916
chr1218668611866915E074-21758
chr1218669431867065E074-21608
chr1218671871867927E074-20746
chr1218680831868413E074-20260
chr1218684171868734E074-19939
chr1218689921869108E074-19565
chr1218698271870195E074-18478
chr1218702111870511E074-18162
chr1218707591870813E074-17860
chr1218711971871330E074-17343
chr1218720621872122E074-16551
chr1218744311874471E074-14202
chr1218752331875317E074-13356
chr1218753191875430E074-13243
chr1218755391875594E074-13079
chr1218768011876873E074-11800
chr1218769871877088E074-11585
chr1218771021877444E074-11229
chr1218777191877793E074-10880
chr1218779201878064E074-10609
chr1218782741878578E074-10095
chr1218788031878873E074-9800
chr1218789631879045E074-9628
chr1218791091879250E074-9423
chr1218793071879491E074-9182
chr1218803741880424E074-8249
chr1218811171881202E074-7471
chr1218814491881489E074-7184
chr1218819021882161E074-6512
chr1218821981882283E074-6390
chr1218825081882653E074-6020
chr1218830481883745E074-4928
chr1218843181884469E074-4204
chr1218845091884569E074-4104
chr1218846651884853E074-3820
chr1218849331885033E074-3640
chr1218851801885280E074-3393
chr1218853161886193E074-2480
chr1218869461887305E074-1368
chr1218878091887859E074-814
chr1218881271888395E074-278
chr1218885651888627E074-46
chr1218887821888850E074109
chr1218889571889298E074284
chr1218896581889702E074985
chr1218904571890572E0741784
chr1218907731891428E0742100
chr1218915391891605E0742866
chr1218931921893360E0744519
chr1218938201893864E0745147
chr1218939651894077E0745292
chr1218944251894475E0745752
chr1218944771894628E0745804
chr1218946511895003E0745978
chr1218955551895658E0746882
chr1218958591896039E0747186
chr1218960561896137E0747383
chr1218961581896254E0747485
chr1218963631896433E0747690
chr1218966561896746E0747983
chr1218967771896827E0748104
chr1218970321897145E0748359
chr1218971551897236E0748482
chr1218972811897331E0748608
chr1218975071897600E0748834
chr1218976071897668E0748934
chr1218979001897986E0749227
chr1218986081898731E0749935
chr1218991241899183E07410451
chr1218995671900061E07410894
chr1219000671901183E07411394
chr1218779201878064E081-10609
chr1218782741878578E081-10095
chr1218788031878873E081-9800
chr1218789631879045E081-9628
chr1218791091879250E081-9423
chr1218793071879491E081-9182
chr1218843181884469E081-4204
chr1218845091884569E081-4104
chr1218846651884853E081-3820
chr1218849331885033E081-3640
chr1218851801885280E081-3393
chr1219135191914219E08124846
chr1219154741915671E08126801
chr1219157051915822E08127032
chr1219158801916060E08127207
chr1219161771916539E08127504
chr1219165531916735E08127880
chr1219168901916980E08128217
chr1219173391917438E08128666
chr1219176351917675E08128962
chr1219177211917836E08129048
chr1219260091926194E08137336
chr1219284141928508E08139741
chr1219286261928718E08139953
chr1219288051928901E08140132
chr1219289991929173E08140326
chr1219310351931436E08142362
chr1219314391931489E08142766
chr1218493611850276E082-38397
chr1218680831868413E082-20260
chr1218782741878578E082-10095
chr1218788031878873E082-9800
chr1218789631879045E082-9628
chr1218791091879250E082-9423
chr1218793071879491E082-9182
chr1218843181884469E082-4204
chr1218845091884569E082-4104
chr1218846651884853E082-3820
chr1218849331885033E082-3640
chr1218851801885280E082-3393
chr1218853161886193E082-2480
chr1219097201910456E08221047
chr1219284141928508E08239741
chr1219286261928718E08239953
chr1219288051928901E08240132
chr1219289991929173E08240326
chr1219361171936197E08247444
chr1219366321936694E08247959
chr1219381321938289E08249459










Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr1219047021907236E06716029
chr1219047021907236E06816029
chr1219047021907236E06916029
chr1219047021907236E07116029
chr1219047021907236E07216029
chr1219047021907236E07316029
chr1219047021907236E07416029