Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 7 | NC_000007.14:g.107719678G>A |
GRCh37.p13 chr 7 | NC_000007.13:g.107360123G>A |
SLC26A4 RefSeqGene | NG_008489.1:g.64044G>A |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | G=0.272 | A=0.728 |
1000Genomes | American | Sub | 694 | G=0.240 | A=0.760 |
1000Genomes | East Asian | Sub | 1008 | G=0.017 | A=0.983 |
1000Genomes | Europe | Sub | 1006 | G=0.302 | A=0.698 |
1000Genomes | Global | Study-wide | 5008 | G=0.197 | A=0.803 |
1000Genomes | South Asian | Sub | 978 | G=0.140 | A=0.860 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.294 | A=0.706 |
The Genome Aggregation Database | African | Sub | 8710 | G=0.276 | A=0.724 |
The Genome Aggregation Database | American | Sub | 838 | G=0.170 | A=0.830 |
The Genome Aggregation Database | East Asian | Sub | 1618 | G=0.012 | A=0.988 |
The Genome Aggregation Database | Europe | Sub | 18462 | G=0.281 | A=0.718 |
The Genome Aggregation Database | Global | Study-wide | 29928 | G=0.262 | A=0.737 |
The Genome Aggregation Database | Other | Sub | 300 | G=0.310 | A=0.690 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | G=0.274 | A=0.725 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.298 | A=0.702 |
PMID | Title | Author | Journal |
---|---|---|---|
23743675 | A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks. | Kapoor M | Hum Genet |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs10265205 | 3.73E-05 | alcohol consumption | 23743675 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr7 | 107333486 | 107333578 | E067 | -26545 |
chr7 | 107333824 | 107334105 | E067 | -26018 |
chr7 | 107334175 | 107334517 | E067 | -25606 |
chr7 | 107334625 | 107335182 | E067 | -24941 |
chr7 | 107335233 | 107335327 | E067 | -24796 |
chr7 | 107383023 | 107383099 | E067 | 22900 |
chr7 | 107386669 | 107386772 | E067 | 26546 |
chr7 | 107387624 | 107387709 | E067 | 27501 |
chr7 | 107387798 | 107387880 | E067 | 27675 |
chr7 | 107333486 | 107333578 | E068 | -26545 |
chr7 | 107333824 | 107334105 | E068 | -26018 |
chr7 | 107334175 | 107334517 | E068 | -25606 |
chr7 | 107334625 | 107335182 | E068 | -24941 |
chr7 | 107335233 | 107335327 | E068 | -24796 |
chr7 | 107341168 | 107341256 | E068 | -18867 |
chr7 | 107341276 | 107341497 | E068 | -18626 |
chr7 | 107382753 | 107382818 | E068 | 22630 |
chr7 | 107386669 | 107386772 | E068 | 26546 |
chr7 | 107387624 | 107387709 | E068 | 27501 |
chr7 | 107387798 | 107387880 | E068 | 27675 |
chr7 | 107387932 | 107387978 | E068 | 27809 |
chr7 | 107388350 | 107388400 | E068 | 28227 |
chr7 | 107333486 | 107333578 | E069 | -26545 |
chr7 | 107333824 | 107334105 | E069 | -26018 |
chr7 | 107334175 | 107334517 | E069 | -25606 |
chr7 | 107334625 | 107335182 | E069 | -24941 |
chr7 | 107335233 | 107335327 | E069 | -24796 |
chr7 | 107335529 | 107335618 | E069 | -24505 |
chr7 | 107337294 | 107337374 | E069 | -22749 |
chr7 | 107337495 | 107337545 | E069 | -22578 |
chr7 | 107383023 | 107383099 | E069 | 22900 |
chr7 | 107386669 | 107386772 | E069 | 26546 |
chr7 | 107387624 | 107387709 | E069 | 27501 |
chr7 | 107387798 | 107387880 | E069 | 27675 |
chr7 | 107387932 | 107387978 | E069 | 27809 |
chr7 | 107332948 | 107333294 | E070 | -26829 |
chr7 | 107333486 | 107333578 | E070 | -26545 |
chr7 | 107333824 | 107334105 | E070 | -26018 |
chr7 | 107334175 | 107334517 | E070 | -25606 |
chr7 | 107334625 | 107335182 | E070 | -24941 |
chr7 | 107335233 | 107335327 | E070 | -24796 |
chr7 | 107335529 | 107335618 | E070 | -24505 |
chr7 | 107335644 | 107335829 | E070 | -24294 |
chr7 | 107337495 | 107337545 | E070 | -22578 |
chr7 | 107337639 | 107338679 | E070 | -21444 |
chr7 | 107383023 | 107383099 | E070 | 22900 |
chr7 | 107386669 | 107386772 | E070 | 26546 |
chr7 | 107387798 | 107387880 | E070 | 27675 |
chr7 | 107387932 | 107387978 | E070 | 27809 |
chr7 | 107388350 | 107388400 | E070 | 28227 |
chr7 | 107332129 | 107332230 | E071 | -27893 |
chr7 | 107332267 | 107332442 | E071 | -27681 |
chr7 | 107332948 | 107333294 | E071 | -26829 |
chr7 | 107333486 | 107333578 | E071 | -26545 |
chr7 | 107333824 | 107334105 | E071 | -26018 |
chr7 | 107335233 | 107335327 | E071 | -24796 |
chr7 | 107337495 | 107337545 | E071 | -22578 |
chr7 | 107337639 | 107338679 | E071 | -21444 |
chr7 | 107383023 | 107383099 | E071 | 22900 |
chr7 | 107333824 | 107334105 | E072 | -26018 |
chr7 | 107334175 | 107334517 | E072 | -25606 |
chr7 | 107334625 | 107335182 | E072 | -24941 |
chr7 | 107337639 | 107338679 | E072 | -21444 |
chr7 | 107383023 | 107383099 | E072 | 22900 |
chr7 | 107386669 | 107386772 | E072 | 26546 |
chr7 | 107333824 | 107334105 | E073 | -26018 |
chr7 | 107334175 | 107334517 | E073 | -25606 |
chr7 | 107334625 | 107335182 | E073 | -24941 |
chr7 | 107335233 | 107335327 | E073 | -24796 |
chr7 | 107337639 | 107338679 | E073 | -21444 |
chr7 | 107333486 | 107333578 | E074 | -26545 |
chr7 | 107333824 | 107334105 | E074 | -26018 |
chr7 | 107334175 | 107334517 | E074 | -25606 |
chr7 | 107335233 | 107335327 | E074 | -24796 |
chr7 | 107333824 | 107334105 | E081 | -26018 |
chr7 | 107337639 | 107338679 | E081 | -21444 |
chr7 | 107338996 | 107339076 | E081 | -21047 |
chr7 | 107334175 | 107334517 | E082 | -25606 |
chr7 | 107334625 | 107335182 | E082 | -24941 |
chr7 | 107337294 | 107337374 | E082 | -22749 |
chr7 | 107337495 | 107337545 | E082 | -22578 |
chr7 | 107337639 | 107338679 | E082 | -21444 |
chr7 | 107386669 | 107386772 | E082 | 26546 |
chr7 | 107387798 | 107387880 | E082 | 27675 |
chr7 | 107387932 | 107387978 | E082 | 27809 |
chr7 | 107388350 | 107388400 | E082 | 28227 |
Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
---|---|---|---|---|
chr7 | 107383118 | 107385525 | E067 | 22995 |
chr7 | 107383118 | 107385525 | E068 | 22995 |
chr7 | 107383118 | 107385525 | E069 | 22995 |
chr7 | 107383118 | 107385525 | E070 | 22995 |
chr7 | 107383118 | 107385525 | E071 | 22995 |
chr7 | 107383118 | 107385525 | E072 | 22995 |
chr7 | 107383118 | 107385525 | E073 | 22995 |
chr7 | 107383118 | 107385525 | E074 | 22995 |
chr7 | 107383118 | 107385525 | E081 | 22995 |
chr7 | 107383118 | 107385525 | E082 | 22995 |