rs1036360

Homo sapiens
A>G
None
Check p-value
SNV (Single Nucleotide Variation)
G=0314 (9413/29908,GnomAD)
G=0341 (9954/29118,TOPMED)
G=0418 (2091/5008,1000G)
G=0306 (1178/3854,ALSPAC)
G=0303 (1125/3708,TWINSUK)
chr12:94059553 (GRCh38.p7) (12q22)
ND
GWASdb2
1   publication(s)
See rs on genome
9 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 12NC_000012.12:g.94059553A>G
GRCh37.p13 chr 12NC_000012.11:g.94453329A>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322A=0.672G=0.328
1000GenomesAmericanSub694A=0.600G=0.400
1000GenomesEast AsianSub1008A=0.462G=0.538
1000GenomesEuropeSub1006A=0.706G=0.294
1000GenomesGlobalStudy-wide5008A=0.582G=0.418
1000GenomesSouth AsianSub978A=0.440G=0.560
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854A=0.694G=0.306
The Genome Aggregation DatabaseAfricanSub8692A=0.656G=0.344
The Genome Aggregation DatabaseAmericanSub832A=0.580G=0.420
The Genome Aggregation DatabaseEast AsianSub1618A=0.470G=0.530
The Genome Aggregation DatabaseEuropeSub18464A=0.723G=0.276
The Genome Aggregation DatabaseGlobalStudy-wide29908A=0.685G=0.314
The Genome Aggregation DatabaseOtherSub302A=0.640G=0.360
Trans-Omics for Precision MedicineGlobalStudy-wide29118A=0.658G=0.341
UK 10K study - TwinsTWIN COHORTStudy-wide3708A=0.697G=0.303
PMID Title Author Journal
19268276Genome-wide association study of smoking initiation and current smoking.Vink JMAm J Hum Genet

P-Value

SNP ID p-value Traits Study
rs10363607.32E-06nicotine smoking19268276

eQTL of rs1036360 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs1036360 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr129446819194469658E06814862
chr129443555494435604E070-17725
chr129443560594435679E070-17650
chr129443571594436439E070-16890
chr129447404794474687E07020718
chr129447510194475327E07021772
chr129447541594475475E07022086
chr129447548494475551E07022155
chr129447559394475648E07022264
chr129447579594475849E07022466
chr129447609594476180E07022766
chr129447618494476287E07022855
chr129447638594476435E07023056
chr129447651794476695E07023188
chr129450208694502206E07048757
chr129450245994502648E07049130
chr129446805494468134E07414725
chr129443555494435604E081-17725
chr129443560594435679E081-17650
chr129443571594436439E081-16890
chr129443555494435604E082-17725
chr129443560594435679E082-17650
chr129443571594436439E082-16890
chr129446724794467685E08213918
chr129446782694467876E08214497
chr129446805494468134E08214725
chr129447559394475648E08222264





Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr129449487794496762E06741548
chr129449487794496762E06841548
chr129449487794496762E06941548
chr129449487794496762E07041548
chr129449487794496762E07141548
chr129449487794496762E07241548
chr129449487794496762E07341548
chr129449487794496762E07441548
chr129449487794496762E08241548