rs10433415

Homo sapiens
G>T
None
Check p-value
SNV (Single Nucleotide Variation)
G==0426 (12761/29892,GnomAD)
G==0464 (13536/29118,TOPMED)
G==0344 (1724/5008,1000G)
G==0356 (1373/3854,ALSPAC)
G==0376 (1394/3708,TWINSUK)
chr3:133566686 (GRCh38.p7) (3q22.1)
AD
GWASdb2
1   publication(s)
See rs on genome
29 Enhancers around
12 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 3NC_000003.12:g.133566686G>T
GRCh37.p13 chr 3NC_000003.11:g.133285530G>T

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.670T=0.330
1000GenomesAmericanSub694G=0.310T=0.690
1000GenomesEast AsianSub1008G=0.130T=0.870
1000GenomesEuropeSub1006G=0.336T=0.664
1000GenomesGlobalStudy-wide5008G=0.344T=0.656
1000GenomesSouth AsianSub978G=0.160T=0.840
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.356T=0.644
The Genome Aggregation DatabaseAfricanSub8686G=0.629T=0.371
The Genome Aggregation DatabaseAmericanSub836G=0.280T=0.720
The Genome Aggregation DatabaseEast AsianSub1618G=0.119T=0.881
The Genome Aggregation DatabaseEuropeSub18450G=0.366T=0.633
The Genome Aggregation DatabaseGlobalStudy-wide29892G=0.426T=0.573
The Genome Aggregation DatabaseOtherSub302G=0.370T=0.630
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.464T=0.535
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.376T=0.624
PMID Title Author Journal
21665994Genome-wide association study identifies two loci strongly affecting transferrin glycosylation.Kutalik ZHum Mol Genet

P-Value

SNP ID p-value Traits Study
rs104334152.13E-08alcohol consumption21665994

eQTL of rs10433415 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs10433415 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr3133254911133255817E067-29713
chr3133297382133297726E06711852
chr3133254911133255817E068-29713
chr3133254911133255817E069-29713
chr3133296654133296726E06911124
chr3133296755133296862E06911225
chr3133297034133297084E06911504
chr3133297382133297726E06911852
chr3133254911133255817E070-29713
chr3133297382133297726E07011852
chr3133297382133297726E07111852
chr3133289963133290140E0724433
chr3133297382133297726E07211852
chr3133296654133296726E07311124
chr3133296755133296862E07311225
chr3133297034133297084E07311504
chr3133297382133297726E07311852
chr3133314061133314138E07328531
chr3133314324133314490E07328794
chr3133314501133314644E07328971
chr3133254911133255817E074-29713
chr3133296654133296726E07411124
chr3133296755133296862E07411225
chr3133297034133297084E07411504
chr3133297382133297726E07411852
chr3133296755133296862E08111225
chr3133297034133297084E08111504
chr3133297382133297726E08111852
chr3133297382133297726E08211852










Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr3133291220133294288E0675690
chr3133291220133294288E0685690
chr3133291220133294288E0695690
chr3133291220133294288E0705690
chr3133294433133294485E0708903
chr3133291220133294288E0715690
chr3133294433133294485E0718903
chr3133291220133294288E0725690
chr3133291220133294288E0735690
chr3133291220133294288E0745690
chr3133291220133294288E0825690
chr3133294433133294485E0828903