SNP Detail Info-rs10464585

Organism: Homo sapiens

Alleles: A>G

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

G=0261 (7794/29854,GnomAD)
G=0235 (6863/29118,TOPMED)
G=0356 (1783/5008,1000G)
G=0242 (931/3854,ALSPAC)
G=0238 (881/3708,TWINSUK)

Position: chr7:93806655 (GRCh38.p7) (7q21.3)

Phenotype: AD

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 0 Enhancer around

Promoter: 0 Promoter around

Sequence Name	Change(s)
GRCh38.p7 chr 7	NC_000007.14:g.93806655A>G
GRCh37.p13 chr 7	NC_000007.13:g.93435967A>G

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	A=0.837	G=0.163
1000Genomes	American	Sub	694	A=0.620	G=0.380
1000Genomes	East Asian	Sub	1008	A=0.374	G=0.626
1000Genomes	Europe	Sub	1006	A=0.720	G=0.280
1000Genomes	Global	Study-wide	5008	A=0.644	G=0.356
1000Genomes	South Asian	Sub	978	A=0.600	G=0.400
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	A=0.758	G=0.242
The Genome Aggregation Database	African	Sub	8710	A=0.819	G=0.181
The Genome Aggregation Database	American	Sub	832	A=0.560	G=0.440
The Genome Aggregation Database	East Asian	Sub	1574	A=0.374	G=0.626
The Genome Aggregation Database	Europe	Sub	18440	A=0.739	G=0.260
The Genome Aggregation Database	Global	Study-wide	29854	A=0.738	G=0.261
The Genome Aggregation Database	Other	Sub	298	A=0.790	G=0.210
Trans-Omics for Precision Medicine	Global	Study-wide	29118	A=0.764	G=0.235
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	A=0.762	G=0.238

PMID	Title	Author	Journal
23953852	Genome-wide association studies of maximum number of drinks.	Pan Y	J Psychiatr Res

SNP ID	p-value	Traits	Study
rs10464585	6.41E-05	alcohol consumption	23953852

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

rs10464585