rs10483282

Homo sapiens
T>G
None
Check p-value
SNV (Single Nucleotide Variation)
T==0424 (12675/29890,GnomAD)
T==0441 (12845/29118,TOPMED)
T==0443 (2217/5008,1000G)
T==0407 (1567/3854,ALSPAC)
T==0401 (1486/3708,TWINSUK)
chr14:23784487 (GRCh38.p7) (14q11.2)
AD
GWASCatalog
1   publication(s)
See rs on genome
21 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 14NC_000014.9:g.23784487T>G
GRCh37.p13 chr 14NC_000014.8:g.24253696T>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.465G=0.535
1000GenomesAmericanSub694T=0.550G=0.450
1000GenomesEast AsianSub1008T=0.439G=0.561
1000GenomesEuropeSub1006T=0.404G=0.596
1000GenomesGlobalStudy-wide5008T=0.443G=0.557
1000GenomesSouth AsianSub978T=0.380G=0.620
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.407G=0.593
The Genome Aggregation DatabaseAfricanSub8694T=0.434G=0.566
The Genome Aggregation DatabaseAmericanSub838T=0.530G=0.470
The Genome Aggregation DatabaseEast AsianSub1616T=0.457G=0.543
The Genome Aggregation DatabaseEuropeSub18442T=0.412G=0.587
The Genome Aggregation DatabaseGlobalStudy-wide29890T=0.424G=0.575
The Genome Aggregation DatabaseOtherSub300T=0.410G=0.590
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.441G=0.558
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.401G=0.599
PMID Title Author Journal
24166409Genome-wide association study of alcohol dependence:significant findings in African- and European-Americans including novel risk loci.Gelernter JMol Psychiatry

P-Value

SNP ID p-value Traits Study
rs104832829E-06alcohol dependence24166409

eQTL of rs10483282 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs10483282 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr142428419924284296E06730503
chr142424258524242667E070-11029
chr142424399624244112E070-9584
chr142424474724244797E070-8899
chr142424494724245206E070-8490
chr142424527424245333E070-8363
chr142424543624245486E070-8210
chr142424550124245551E070-8145
chr142428419924284296E07130503
chr142424543624245486E072-8210
chr142424550124245551E072-8145
chr142428419924284296E07230503
chr142428419924284296E07430503
chr142424494724245206E081-8490
chr142424527424245333E081-8363
chr142424543624245486E081-8210
chr142424550124245551E081-8145
chr142424494724245206E082-8490
chr142424527424245333E082-8363
chr142424543624245486E082-8210
chr142424550124245551E082-8145