SNP Detail Info-rs10506030

Sequence Name	Change(s)
GRCh38.p7 chr 12	NC_000012.12:g.28362948A>T
GRCh37.p13 chr 12	NC_000012.11:g.28515881A>T

Molecule type	Change	Amino acid[Codon]	SO Term
CCDC91 transcript	NM_018318.3:c.	N/A	Intron Variant
CCDC91 transcript variant X2	XM_005253413.1:c.	N/A	Intron Variant
CCDC91 transcript variant X2	XM_005253414.1:c.	N/A	Intron Variant
CCDC91 transcript variant X14	XM_005253415.1:c.	N/A	Intron Variant
CCDC91 transcript variant X1	XM_006719103.3:c.	N/A	Intron Variant
CCDC91 transcript variant X3	XM_006719104.2:c.	N/A	Intron Variant
CCDC91 transcript variant X7	XM_006719105.1:c.	N/A	Intron Variant
CCDC91 transcript variant X5	XM_011520729.2:c.	N/A	Intron Variant
CCDC91 transcript variant X8	XM_011520731.2:c.	N/A	Intron Variant
CCDC91 transcript variant X18	XM_011520733.2:c.	N/A	Intron Variant
CCDC91 transcript variant X19	XM_011520734.1:c.	N/A	Intron Variant
CCDC91 transcript variant X15	XM_011520735.1:c.	N/A	Intron Variant
CCDC91 transcript variant X5	XM_017019569.1:c.	N/A	Intron Variant
CCDC91 transcript variant X9	XM_017019570.1:c.	N/A	Intron Variant
CCDC91 transcript variant X10	XM_017019571.1:c.	N/A	Intron Variant
CCDC91 transcript variant X10	XM_017019572.1:c.	N/A	Intron Variant
CCDC91 transcript variant X12	XM_017019573.1:c.	N/A	Intron Variant
CCDC91 transcript variant X13	XM_017019574.1:c.	N/A	Intron Variant
CCDC91 transcript variant X15	XM_017019575.1:c.	N/A	Intron Variant
CCDC91 transcript variant X16	XM_017019576.1:c.	N/A	Intron Variant
CCDC91 transcript variant X17	XM_017019577.1:c.	N/A	Intron Variant

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	A=0.998	T=0.002
1000Genomes	American	Sub	694	A=0.970	T=0.030
1000Genomes	East Asian	Sub	1008	A=0.984	T=0.016
1000Genomes	Europe	Sub	1006	A=0.960	T=0.040
1000Genomes	Global	Study-wide	5008	A=0.959	T=0.041
1000Genomes	South Asian	Sub	978	A=0.870	T=0.130
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	A=0.960	T=0.040
The Genome Aggregation Database	African	Sub	8704	A=0.993	T=0.007
The Genome Aggregation Database	American	Sub	838	A=0.960	T=0.040
The Genome Aggregation Database	East Asian	Sub	1618	A=0.989	T=0.011
The Genome Aggregation Database	Europe	Sub	18454	A=0.965	T=0.034
The Genome Aggregation Database	Global	Study-wide	29914	A=0.974	T=0.025
The Genome Aggregation Database	Other	Sub	300	A=0.930	T=0.070
Trans-Omics for Precision Medicine	Global	Study-wide	29118	A=0.973	T=0.026
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	A=0.964	T=0.036

PMID	Title	Author	Journal
21314694	Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample.	Kendler KS	Alcohol Clin Exp Res

SNP ID	p-value	Traits	Study
rs10506030	0.000542	alcohol dependence	21314694

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

rs10506030