rs10511924

Homo sapiens
G>C
None
Check p-value
SNV (Single Nucleotide Variation)
C=0035 (1067/29978,GnomAD)
C=0036 (1070/29118,TOPMED)
C=0023 (116/5008,1000G)
C=0061 (237/3854,ALSPAC)
C=0055 (205/3708,TWINSUK)
chr9:36007608 (GRCh38.p7) (9p13.3)
ND
GWASdb2
1   publication(s)
See rs on genome
78 Enhancers around
10 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 9NC_000009.12:g.36007608G>C
GRCh37.p13 chr 9NC_000009.11:g.36007605G>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.997C=0.003
1000GenomesAmericanSub694G=0.960C=0.040
1000GenomesEast AsianSub1008G=1.000C=0.000
1000GenomesEuropeSub1006G=0.919C=0.081
1000GenomesGlobalStudy-wide5008G=0.977C=0.023
1000GenomesSouth AsianSub978G=1.000C=0.000
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.939C=0.061
The Genome Aggregation DatabaseAfricanSub8732G=0.988C=0.012
The Genome Aggregation DatabaseAmericanSub836G=0.970C=0.030
The Genome Aggregation DatabaseEast AsianSub1622G=1.000C=0.000
The Genome Aggregation DatabaseEuropeSub18486G=0.949C=0.050
The Genome Aggregation DatabaseGlobalStudy-wide29978G=0.964C=0.035
The Genome Aggregation DatabaseOtherSub302G=0.960C=0.040
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.963C=0.036
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.945C=0.055
PMID Title Author Journal
17158188Novel genes identified in a high-density genome wide association study for nicotine dependence.Bierut LJHum Mol Genet

P-Value

SNP ID p-value Traits Study
rs105119240.000736nicotine dependence17158188

eQTL of rs10511924 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs10511924 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr93603863736038731E06731032
chr93603886836039704E06731263
chr93603978136039962E06732176
chr93604016636040535E06732561
chr93604575236045878E06738147
chr93604596336046029E06738358
chr93604625136046365E06738646
chr93604656236046643E06738957
chr93604671736046800E06739112
chr93604710436047191E06739499
chr93605706236057129E06749457
chr93603845536038531E06830850
chr93603863736038731E06831032
chr93603886836039704E06831263
chr93605706236057129E06849457
chr93603886836039704E06931263
chr93603978136039962E06932176
chr93604016636040535E06932561
chr93604596336046029E06938358
chr93604625136046365E06938646
chr93604656236046643E06938957
chr93603845536038531E07030850
chr93604468536044807E07037080
chr93604484836044916E07037243
chr93604508936045167E07037484
chr93604567836045737E07038073
chr93604575236045878E07038147
chr93604596336046029E07038358
chr93604625136046365E07038646
chr93604656236046643E07038957
chr93604671736046800E07039112
chr93605706236057129E07049457
chr93605722236057272E07049617
chr93605738036057464E07049775
chr93605754036057605E07049935
chr93600872836009252E0711123
chr93600926736009397E0711662
chr93603886836039704E07131263
chr93603978136039962E07132176
chr93604016636040535E07132561
chr93604054336040906E07132938
chr93604095436041034E07133349
chr93604122336041273E07133618
chr93604135136041447E07133746
chr93604150536041855E07133900
chr93604567836045737E07138073
chr93604575236045878E07138147
chr93604596336046029E07138358
chr93604625136046365E07138646
chr93604656236046643E07138957
chr93603886836039704E07231263
chr93603845536038531E07330850
chr93603863736038731E07331032
chr93603886836039704E07331263
chr93600872836009252E0741123
chr93600926736009397E0741662
chr93603605636036148E07428451
chr93603845536038531E07430850
chr93603863736038731E07431032
chr93603886836039704E07431263
chr93604122336041273E07433618
chr93604135136041447E07433746
chr93604150536041855E07433900
chr93604567836045737E07438073
chr93604575236045878E07438147
chr93604596336046029E07438358
chr93604625136046365E07438646
chr93604656236046643E07438957
chr93605678036056830E07449175
chr93605706236057129E07449457
chr93605722236057272E07449617
chr93605738036057464E07449775
chr93605754036057605E07449935
chr93603845536038531E08130850
chr93603863736038731E08131032
chr93604468536044807E08137080
chr93603863736038731E08231032
chr93603886836039704E08231263










Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr93603636136038075E06728756
chr93603636136038075E06828756
chr93603636136038075E06928756
chr93603636136038075E07028756
chr93603636136038075E07128756
chr93603636136038075E07228756
chr93603636136038075E07328756
chr93603636136038075E07428756
chr93603636136038075E08128756
chr93603636136038075E08228756