rs10512034

Homo sapiens
G>A
None
Check p-value
SNV (Single Nucleotide Variation)
A=0092 (2763/29950,GnomAD)
A=0104 (3054/29118,TOPMED)
A=0131 (657/5008,1000G)
A=0042 (163/3854,ALSPAC)
A=0044 (163/3708,TWINSUK)
chr9:2000684 (GRCh38.p7) (9p24.3)
ND
GWASdb2
1   publication(s)
See rs on genome
175 Enhancers around
10 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 9NC_000009.12:g.2000684G>A
GRCh37.p13 chr 9NC_000009.11:g.2000684G>A

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.832A=0.168
1000GenomesAmericanSub694G=0.920A=0.080
1000GenomesEast AsianSub1008G=0.752A=0.248
1000GenomesEuropeSub1006G=0.954A=0.046
1000GenomesGlobalStudy-wide5008G=0.869A=0.131
1000GenomesSouth AsianSub978G=0.920A=0.080
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.958A=0.042
The Genome Aggregation DatabaseAfricanSub8704G=0.843A=0.157
The Genome Aggregation DatabaseAmericanSub838G=0.930A=0.070
The Genome Aggregation DatabaseEast AsianSub1616G=0.765A=0.235
The Genome Aggregation DatabaseEuropeSub18490G=0.948A=0.051
The Genome Aggregation DatabaseGlobalStudy-wide29950G=0.907A=0.092
The Genome Aggregation DatabaseOtherSub302G=0.970A=0.030
Trans-Omics for Precision MedicineGlobalStudy-wide29118G=0.895A=0.104
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.956A=0.044
PMID Title Author Journal
20158304A genomewide association study of nicotine and alcohol dependence in Australian and Dutch populations.Lind PATwin Res Hum Genet

P-Value

SNP ID p-value Traits Study
rs105120341.02E-05alcohol and nictotine co-dependence20158304

eQTL of rs10512034 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs10512034 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr920198972020045E06719213
chr920213742021458E06720690
chr920214832021543E06720799
chr920235402024160E06722856
chr920242132024438E06723529
chr920244702024556E06723786
chr920246992024871E06724015
chr920249012024986E06724217
chr920250452025730E06724361
chr920272902027375E06726606
chr920274302027482E06726746
chr920276312028009E06726947
chr920280792028226E06727395
chr920282772028334E06727593
chr920288612028911E06728177
chr920289722029046E06728288
chr920290962029147E06728412
chr920198972020045E06819213
chr920201422020193E06819458
chr920203232020373E06819639
chr920204082020448E06819724
chr920217882022173E06821104
chr920222072022381E06821523
chr920224782023390E06821794
chr920234542023526E06822770
chr920235402024160E06822856
chr920242132024438E06823529
chr920244702024556E06823786
chr920246992024871E06824015
chr920249012024986E06824217
chr920250452025730E06824361
chr920258802025930E06825196
chr920259912026073E06825307
chr920261382026203E06825454
chr920262982026527E06825614
chr920266132027002E06825929
chr920270962027146E06826412
chr920272902027375E06826606
chr920274302027482E06826746
chr920276312028009E06826947
chr920280792028226E06827395
chr920282772028334E06827593
chr920288612028911E06828177
chr920289722029046E06828288
chr920290962029147E06828412
chr920295732029742E06828889
chr920198972020045E06919213
chr920201422020193E06919458
chr920203232020373E06919639
chr920204082020448E06919724
chr920213742021458E06920690
chr920214832021543E06920799
chr920217882022173E06921104
chr920222072022381E06921523
chr920224782023390E06921794
chr920234542023526E06922770
chr920235402024160E06922856
chr920242132024438E06923529
chr920244702024556E06923786
chr920246992024871E06924015
chr920249012024986E06924217
chr920250452025730E06924361
chr920258802025930E06925196
chr920259912026073E06925307
chr920261382026203E06925454
chr920276312028009E06926947
chr920280792028226E06927395
chr920282772028334E06927593
chr920288612028911E06928177
chr920289722029046E06928288
chr920290962029147E06928412
chr920302482030292E06929564
chr920322792032472E06931595
chr920324872032599E06931803
chr919788761979368E070-21316
chr919794411979544E070-21140
chr919795821980339E070-20345
chr920198972020045E07019213
chr920201422020193E07019458
chr920242132024438E07023529
chr920244702024556E07023786
chr920246992024871E07024015
chr920276312028009E07026947
chr920464192046463E07045735
chr920464702046668E07045786
chr920467202046824E07046036
chr920198972020045E07119213
chr920201422020193E07119458
chr920203232020373E07119639
chr920204082020448E07119724
chr920217882022173E07121104
chr920222072022381E07121523
chr920224782023390E07121794
chr920234542023526E07122770
chr920235402024160E07122856
chr920242132024438E07123529
chr920244702024556E07123786
chr920246992024871E07124015
chr920249012024986E07124217
chr920250452025730E07124361
chr920258802025930E07125196
chr920259912026073E07125307
chr920266132027002E07125929
chr920270962027146E07126412
chr920272902027375E07126606
chr920274302027482E07126746
chr920276312028009E07126947
chr920280792028226E07127395
chr920282772028334E07127593
chr920288612028911E07128177
chr920289722029046E07128288
chr920290962029147E07128412
chr920198972020045E07219213
chr920201422020193E07219458
chr920222072022381E07221523
chr920224782023390E07221794
chr920246992024871E07224015
chr920249012024986E07224217
chr920250452025730E07224361
chr920258802025930E07225196
chr920259912026073E07225307
chr920261382026203E07225454
chr920262982026527E07225614
chr920266132027002E07225929
chr920270962027146E07226412
chr920272902027375E07226606
chr920274302027482E07226746
chr920276312028009E07226947
chr920280792028226E07227395
chr920282772028334E07227593
chr920290962029147E07228412
chr920198972020045E07319213
chr920204082020448E07319724
chr920234542023526E07322770
chr920235402024160E07322856
chr920242132024438E07323529
chr920244702024556E07323786
chr920246992024871E07324015
chr920249012024986E07324217
chr920250452025730E07324361
chr920258802025930E07325196
chr920259912026073E07325307
chr920261382026203E07325454
chr920276312028009E07326947
chr920280792028226E07327395
chr920282772028334E07327593
chr920288612028911E07328177
chr920289722029046E07328288
chr920290962029147E07328412
chr920295732029742E07328889
chr920298852029935E07329201
chr920308672030938E07330183
chr920224782023390E07421794
chr920234542023526E07422770
chr920235402024160E07422856
chr920242132024438E07423529
chr920244702024556E07423786
chr920246992024871E07424015
chr920249012024986E07424217
chr920250452025730E07424361
chr920300862030136E07429402
chr920302482030292E07429564
chr920217882022173E08121104
chr920222072022381E08121523
chr920224782023390E08121794
chr920280792028226E08127395
chr920282772028334E08127593
chr920288612028911E08128177
chr920289722029046E08128288
chr920290962029147E08128412
chr920300862030136E08129402
chr920467202046824E08146036
chr919794411979544E082-21140
chr919795821980339E082-20345
chr920234542023526E08222770










Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr920136192019557E06712935
chr920136192019557E06812935
chr920136192019557E06912935
chr920136192019557E07012935
chr920136192019557E07112935
chr920136192019557E07212935
chr920136192019557E07312935
chr920136192019557E07412935
chr920136192019557E08112935
chr920136192019557E08212935