SNP Detail Info-rs10513729

Sequence Name	Change(s)
GRCh38.p7 chr 3	NC_000003.12:g.174963457T>G
GRCh37.p13 chr 3	NC_000003.11:g.174681247T>G

Molecule type	Change	Amino acid[Codon]	SO Term
NAALADL2 transcript	NM_207015.2:c.	N/A	Intron Variant
NAALADL2 transcript variant X12	XM_006713560.2:c.	N/A	Intron Variant
NAALADL2 transcript variant X1	XM_011512612.2:c.	N/A	Intron Variant
NAALADL2 transcript variant X2	XM_011512613.1:c.	N/A	Intron Variant
NAALADL2 transcript variant X15	XM_011512615.2:c.	N/A	Intron Variant
NAALADL2 transcript variant X19	XM_011512617.2:c.	N/A	Intron Variant
NAALADL2 transcript variant X3	XM_017006070.1:c.	N/A	Intron Variant
NAALADL2 transcript variant X4	XM_017006071.1:c.	N/A	Intron Variant
NAALADL2 transcript variant X5	XM_017006072.1:c.	N/A	Intron Variant
NAALADL2 transcript variant X6	XM_017006073.1:c.	N/A	Intron Variant
NAALADL2 transcript variant X7	XM_017006074.1:c.	N/A	Intron Variant
NAALADL2 transcript variant X8	XM_017006075.1:c.	N/A	Intron Variant
NAALADL2 transcript variant X9	XM_017006076.1:c.	N/A	Intron Variant
NAALADL2 transcript variant X10	XM_017006077.1:c.	N/A	Intron Variant
NAALADL2 transcript variant X11	XM_017006078.1:c.	N/A	Intron Variant
NAALADL2 transcript variant X13	XM_017006079.1:c.	N/A	Intron Variant
NAALADL2 transcript variant X14	XM_017006080.1:c.	N/A	Intron Variant
NAALADL2 transcript variant X16	XM_017006081.1:c.	N/A	Intron Variant
NAALADL2 transcript variant X17	XM_017006082.1:c.	N/A	Intron Variant
NAALADL2 transcript variant X18	XM_011512616.2:c.	N/A	Genic Upstream Transcript Variant
NAALADL2 transcript variant X20	XM_017006083.1:c.	N/A	Genic Upstream Transcript Variant

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	T=0.638	G=0.362
1000Genomes	American	Sub	694	T=0.600	G=0.400
1000Genomes	East Asian	Sub	1008	T=0.862	G=0.138
1000Genomes	Europe	Sub	1006	T=0.437	G=0.563
1000Genomes	Global	Study-wide	5008	T=0.638	G=0.362
1000Genomes	South Asian	Sub	978	T=0.640	G=0.360
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	T=0.416	G=0.584
The Genome Aggregation Database	African	Sub	8708	T=0.614	G=0.386
The Genome Aggregation Database	American	Sub	836	T=0.680	G=0.320
The Genome Aggregation Database	East Asian	Sub	1602	T=0.866	G=0.134
The Genome Aggregation Database	Europe	Sub	18438	T=0.444	G=0.555
The Genome Aggregation Database	Global	Study-wide	29886	T=0.524	G=0.475
The Genome Aggregation Database	Other	Sub	302	T=0.610	G=0.390
Trans-Omics for Precision Medicine	Global	Study-wide	29118	T=0.543	G=0.456
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	T=0.414	G=0.586

PMID	Title	Author	Journal
24277619	ALDH2 is associated to alcohol dependence and is the major genetic determinant of "daily maximum drinks" in a GWAS study of an isolated rural Chinese sample.	Quillen EE	Am J Med Genet B Neuropsychiatr Genet

SNP ID	p-value	Traits	Study
rs10513729	0.000577	alcohol consumption (maxi-drinks)	24277619

Position (v37)	eGene	GeneID	Variant	p-value	TSS	Tissue
There is no eQTL annotation for this SNP

Probe ID	Position	Gene	beta	p-value
There is no meQTL annotation for this SNP

Chromosome	Start	End	Region	Distance ( -/+ : Up/Downstream )
chr3	174676783	174677052	E068	-4195
chr3	174677188	174677390	E068	-3857
chr3	174674838	174675167	E071	-6080
chr3	174675273	174675343	E071	-5904
chr3	174675388	174675957	E071	-5290
chr3	174676264	174676768	E071	-4479
chr3	174676783	174677052	E071	-4195
chr3	174677188	174677390	E071	-3857
chr3	174677188	174677390	E072	-3857
chr3	174674838	174675167	E074	-6080
chr3	174675273	174675343	E074	-5904
chr3	174675388	174675957	E074	-5290
chr3	174677188	174677390	E081	-3857

rs10513729