rs10741210

Homo sapiens
G>A
None
Check p-value
SNV (Single Nucleotide Variation)
A=0453 (13216/29114,GnomAD)
A=0402 (2015/5008,1000G)
A=0392 (1510/3854,ALSPAC)
A=0391 (1450/3708,TWINSUK)
chr10:130186048 (GRCh38.p7) (10q26.3)
AD
GWASCatalog
1   publication(s)
See rs on genome
24 Enhancers around
7 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 10NC_000010.11:g.130186048G>A
GRCh37.p13 chr 10NC_000010.10:g.131984312G>A

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322G=0.306A=0.694
1000GenomesAmericanSub694G=0.510A=0.490
1000GenomesEast AsianSub1008G=0.756A=0.244
1000GenomesEuropeSub1006G=0.622A=0.378
1000GenomesGlobalStudy-wide5008G=0.598A=0.402
1000GenomesSouth AsianSub978G=0.870A=0.130
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854G=0.608A=0.392
The Genome Aggregation DatabaseAfricanSub8618G=0.344A=0.656
The Genome Aggregation DatabaseAmericanSub830G=0.570A=0.430
The Genome Aggregation DatabaseEast AsianSub1608G=0.790A=0.210
The Genome Aggregation DatabaseEuropeSub17764G=0.620A=0.379
The Genome Aggregation DatabaseGlobalStudy-wide29114G=0.546A=0.453
The Genome Aggregation DatabaseOtherSub294G=0.580A=0.420
UK 10K study - TwinsTWIN COHORTStudy-wide3708G=0.609A=0.391
PMID Title Author Journal
26365420The genetics of alcohol dependence: Twin and SNP-based heritability, and genome-wide association study based on AUDIT scores.Mbarek HAm J Med Genet B Neuropsychiatr Genet

P-Value

SNP ID p-value Traits Study
rs107412109E-06alcohol dependence26365420

eQTL of rs10741210 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs10741210 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr10131936526131937183E067-47129
chr10131936526131937183E068-47129
chr10131967856131968153E068-16159
chr10131977840131978348E068-5964
chr10131978439131978489E068-5823
chr10131936526131937183E070-47129
chr10131972485131972833E070-11479
chr10131989872131989923E0705560
chr10131989980131990063E0705668
chr10131990705131990755E0706393
chr10131990781131990900E0706469
chr10131991323131991373E0707011
chr10132027392132027442E07043080
chr10131936526131937183E071-47129
chr10131936526131937183E072-47129
chr10131944709131944763E072-39549
chr10131936526131937183E073-47129
chr10131936526131937183E074-47129
chr10131944389131944527E074-39785
chr10131944709131944763E074-39549
chr10131975627131976086E074-8226
chr10131977840131978348E074-5964
chr10131936526131937183E081-47129
chr10131937357131937592E081-46720








Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr10131988177131989444E0673865
chr10131988177131989444E0683865
chr10131988177131989444E0703865
chr10131988177131989444E0713865
chr10131988177131989444E0723865
chr10131988177131989444E0733865
chr10131988177131989444E0823865