| Sequence Name | Change(s) |
|---|---|
| GRCh38.p7 chr 12 | NC_000012.12:g.51222798A>G |
| GRCh37.p13 chr 12 | NC_000012.11:g.51616582A>G |
| Study | Population | Group | Sample # | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| 1000Genomes | African | Sub | 1322 | A=0.232 | G=0.768 |
| 1000Genomes | American | Sub | 694 | A=0.330 | G=0.670 |
| 1000Genomes | East Asian | Sub | 1008 | A=0.288 | G=0.712 |
| 1000Genomes | Europe | Sub | 1006 | A=0.307 | G=0.693 |
| 1000Genomes | Global | Study-wide | 5008 | A=0.280 | G=0.720 |
| 1000Genomes | South Asian | Sub | 978 | A=0.280 | G=0.720 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | A=0.293 | G=0.707 |
| The Genome Aggregation Database | African | Sub | 8708 | A=0.260 | G=0.740 |
| The Genome Aggregation Database | American | Sub | 836 | A=0.320 | G=0.680 |
| The Genome Aggregation Database | East Asian | Sub | 1620 | A=0.285 | G=0.715 |
| The Genome Aggregation Database | Europe | Sub | 18456 | A=0.309 | G=0.690 |
| The Genome Aggregation Database | Global | Study-wide | 29922 | A=0.294 | G=0.705 |
| The Genome Aggregation Database | Other | Sub | 302 | A=0.370 | G=0.630 |
| Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | A=0.279 | G=0.720 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | A=0.300 | G=0.700 |
| PMID | Title | Author | Journal |
|---|---|---|---|
| 21314694 | Genomewide association analysis of symptoms of alcohol dependence in the molecular genetics of schizophrenia (MGS2) control sample. | Kendler KS | Alcohol Clin Exp Res |
| SNP ID | p-value | Traits | Study |
|---|---|---|---|
| rs10747608 | 0.000851 | alcohol dependence | 21314694 |
| Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue |
|---|---|---|---|---|---|---|
| Chr12:51616582 | POU6F1 | ENSG00000184271.11 | A>G | 6.1624e-4 | 5105 | Cerebellum |
| Probe ID | Position | Gene | beta | p-value |
|---|---|---|---|---|
| cg20712883 | chr12:51590929 | POU6F1 | -0.0204121107777331 | 5.7756e-12 |
There is no significant Hi-C chromatin interaction data for this SNP.
| Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
|---|---|---|---|---|
| chr12 | 51580851 | 51580906 | E067 | -35676 |
| chr12 | 51581245 | 51581345 | E067 | -35237 |
| chr12 | 51598693 | 51598929 | E067 | -17653 |
| chr12 | 51599108 | 51599158 | E067 | -17424 |
| chr12 | 51599194 | 51599238 | E067 | -17344 |
| chr12 | 51599278 | 51599318 | E067 | -17264 |
| chr12 | 51599360 | 51599500 | E067 | -17082 |
| chr12 | 51604254 | 51604304 | E067 | -12278 |
| chr12 | 51604308 | 51604419 | E067 | -12163 |
| chr12 | 51604517 | 51604679 | E067 | -11903 |
| chr12 | 51604691 | 51605285 | E067 | -11297 |
| chr12 | 51605319 | 51605390 | E067 | -11192 |
| chr12 | 51605451 | 51605562 | E067 | -11020 |
| chr12 | 51619412 | 51619462 | E067 | 2830 |
| chr12 | 51634371 | 51634548 | E067 | 17789 |
| chr12 | 51634647 | 51634720 | E067 | 18065 |
| chr12 | 51634789 | 51635160 | E067 | 18207 |
| chr12 | 51635183 | 51635257 | E067 | 18601 |
| chr12 | 51577135 | 51577231 | E068 | -39351 |
| chr12 | 51577563 | 51577617 | E068 | -38965 |
| chr12 | 51598462 | 51598536 | E068 | -18046 |
| chr12 | 51598693 | 51598929 | E068 | -17653 |
| chr12 | 51604254 | 51604304 | E068 | -12278 |
| chr12 | 51604308 | 51604419 | E068 | -12163 |
| chr12 | 51604517 | 51604679 | E068 | -11903 |
| chr12 | 51604691 | 51605285 | E068 | -11297 |
| chr12 | 51605319 | 51605390 | E068 | -11192 |
| chr12 | 51605451 | 51605562 | E068 | -11020 |
| chr12 | 51609411 | 51609461 | E068 | -7121 |
| chr12 | 51609465 | 51609542 | E068 | -7040 |
| chr12 | 51610046 | 51610187 | E068 | -6395 |
| chr12 | 51634647 | 51634720 | E068 | 18065 |
| chr12 | 51634789 | 51635160 | E068 | 18207 |
| chr12 | 51635183 | 51635257 | E068 | 18601 |
| chr12 | 51635346 | 51635470 | E068 | 18764 |
| chr12 | 51635770 | 51635820 | E068 | 19188 |
| chr12 | 51640661 | 51640747 | E068 | 24079 |
| chr12 | 51640847 | 51640932 | E068 | 24265 |
| chr12 | 51577135 | 51577231 | E069 | -39351 |
| chr12 | 51577563 | 51577617 | E069 | -38965 |
| chr12 | 51599108 | 51599158 | E069 | -17424 |
| chr12 | 51599194 | 51599238 | E069 | -17344 |
| chr12 | 51599278 | 51599318 | E069 | -17264 |
| chr12 | 51599360 | 51599500 | E069 | -17082 |
| chr12 | 51604254 | 51604304 | E069 | -12278 |
| chr12 | 51604308 | 51604419 | E069 | -12163 |
| chr12 | 51605319 | 51605390 | E069 | -11192 |
| chr12 | 51616164 | 51616259 | E069 | -323 |
| chr12 | 51616361 | 51616433 | E069 | -149 |
| chr12 | 51619412 | 51619462 | E069 | 2830 |
| chr12 | 51634371 | 51634548 | E069 | 17789 |
| chr12 | 51634647 | 51634720 | E069 | 18065 |
| chr12 | 51634789 | 51635160 | E069 | 18207 |
| chr12 | 51635183 | 51635257 | E069 | 18601 |
| chr12 | 51636571 | 51636672 | E069 | 19989 |
| chr12 | 51636788 | 51637141 | E069 | 20206 |
| chr12 | 51577563 | 51577617 | E070 | -38965 |
| chr12 | 51578155 | 51578272 | E070 | -38310 |
| chr12 | 51609411 | 51609461 | E070 | -7121 |
| chr12 | 51609465 | 51609542 | E070 | -7040 |
| chr12 | 51609611 | 51609655 | E070 | -6927 |
| chr12 | 51617358 | 51617398 | E070 | 776 |
| chr12 | 51620214 | 51620268 | E070 | 3632 |
| chr12 | 51622717 | 51622828 | E070 | 6135 |
| chr12 | 51622885 | 51623011 | E070 | 6303 |
| chr12 | 51623312 | 51623471 | E070 | 6730 |
| chr12 | 51577563 | 51577617 | E071 | -38965 |
| chr12 | 51599194 | 51599238 | E071 | -17344 |
| chr12 | 51599278 | 51599318 | E071 | -17264 |
| chr12 | 51599360 | 51599500 | E071 | -17082 |
| chr12 | 51604254 | 51604304 | E071 | -12278 |
| chr12 | 51604308 | 51604419 | E071 | -12163 |
| chr12 | 51604517 | 51604679 | E071 | -11903 |
| chr12 | 51604691 | 51605285 | E071 | -11297 |
| chr12 | 51605319 | 51605390 | E071 | -11192 |
| chr12 | 51605451 | 51605562 | E071 | -11020 |
| chr12 | 51616164 | 51616259 | E071 | -323 |
| chr12 | 51616361 | 51616433 | E071 | -149 |
| chr12 | 51616451 | 51616611 | E071 | 0 |
| chr12 | 51634371 | 51634548 | E071 | 17789 |
| chr12 | 51634647 | 51634720 | E071 | 18065 |
| chr12 | 51634789 | 51635160 | E071 | 18207 |
| chr12 | 51635183 | 51635257 | E071 | 18601 |
| chr12 | 51635346 | 51635470 | E071 | 18764 |
| chr12 | 51640847 | 51640932 | E071 | 24265 |
| chr12 | 51577563 | 51577617 | E072 | -38965 |
| chr12 | 51598462 | 51598536 | E072 | -18046 |
| chr12 | 51598693 | 51598929 | E072 | -17653 |
| chr12 | 51599108 | 51599158 | E072 | -17424 |
| chr12 | 51599194 | 51599238 | E072 | -17344 |
| chr12 | 51599278 | 51599318 | E072 | -17264 |
| chr12 | 51599360 | 51599500 | E072 | -17082 |
| chr12 | 51604254 | 51604304 | E072 | -12278 |
| chr12 | 51604308 | 51604419 | E072 | -12163 |
| chr12 | 51605451 | 51605562 | E072 | -11020 |
| chr12 | 51616164 | 51616259 | E072 | -323 |
| chr12 | 51616361 | 51616433 | E072 | -149 |
| chr12 | 51616451 | 51616611 | E072 | 0 |
| chr12 | 51634371 | 51634548 | E072 | 17789 |
| chr12 | 51634647 | 51634720 | E072 | 18065 |
| chr12 | 51634789 | 51635160 | E072 | 18207 |
| chr12 | 51635183 | 51635257 | E072 | 18601 |
| chr12 | 51635346 | 51635470 | E072 | 18764 |
| chr12 | 51635770 | 51635820 | E072 | 19188 |
| chr12 | 51635889 | 51636241 | E072 | 19307 |
| chr12 | 51604308 | 51604419 | E073 | -12163 |
| chr12 | 51604517 | 51604679 | E073 | -11903 |
| chr12 | 51604691 | 51605285 | E073 | -11297 |
| chr12 | 51605319 | 51605390 | E073 | -11192 |
| chr12 | 51605451 | 51605562 | E073 | -11020 |
| chr12 | 51610046 | 51610187 | E073 | -6395 |
| chr12 | 51613693 | 51613793 | E073 | -2789 |
| chr12 | 51635183 | 51635257 | E073 | 18601 |
| chr12 | 51635346 | 51635470 | E073 | 18764 |
| chr12 | 51635770 | 51635820 | E073 | 19188 |
| chr12 | 51635889 | 51636241 | E073 | 19307 |
| chr12 | 51639941 | 51640616 | E073 | 23359 |
| chr12 | 51640661 | 51640747 | E073 | 24079 |
| chr12 | 51592345 | 51592557 | E074 | -24025 |
| chr12 | 51598203 | 51598257 | E074 | -18325 |
| chr12 | 51598462 | 51598536 | E074 | -18046 |
| chr12 | 51598693 | 51598929 | E074 | -17653 |
| chr12 | 51599108 | 51599158 | E074 | -17424 |
| chr12 | 51599194 | 51599238 | E074 | -17344 |
| chr12 | 51599278 | 51599318 | E074 | -17264 |
| chr12 | 51599360 | 51599500 | E074 | -17082 |
| chr12 | 51604254 | 51604304 | E074 | -12278 |
| chr12 | 51604308 | 51604419 | E074 | -12163 |
| chr12 | 51605319 | 51605390 | E074 | -11192 |
| chr12 | 51605451 | 51605562 | E074 | -11020 |
| chr12 | 51616361 | 51616433 | E074 | -149 |
| chr12 | 51619412 | 51619462 | E074 | 2830 |
| chr12 | 51635183 | 51635257 | E074 | 18601 |
| chr12 | 51613693 | 51613793 | E081 | -2789 |
| chr12 | 51613855 | 51614032 | E081 | -2550 |
| chr12 | 51619412 | 51619462 | E081 | 2830 |
| chr12 | 51620214 | 51620268 | E081 | 3632 |
| chr12 | 51621034 | 51621133 | E081 | 4452 |
| chr12 | 51622717 | 51622828 | E081 | 6135 |
| chr12 | 51622885 | 51623011 | E081 | 6303 |
| chr12 | 51623312 | 51623471 | E081 | 6730 |
| chr12 | 51620214 | 51620268 | E082 | 3632 |
| chr12 | 51622717 | 51622828 | E082 | 6135 |
| chr12 | 51622885 | 51623011 | E082 | 6303 |
| chr12 | 51623312 | 51623471 | E082 | 6730 |
| chr12 | 51634371 | 51634548 | E082 | 17789 |
| chr12 | 51634647 | 51634720 | E082 | 18065 |
| Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
|---|---|---|---|---|
| chr12 | 51610411 | 51610774 | E067 | -5808 |
| chr12 | 51610787 | 51613613 | E067 | -2969 |
| chr12 | 51631746 | 51633300 | E067 | 15164 |
| chr12 | 51662785 | 51665217 | E067 | 46203 |
| chr12 | 51610411 | 51610774 | E068 | -5808 |
| chr12 | 51610787 | 51613613 | E068 | -2969 |
| chr12 | 51631746 | 51633300 | E068 | 15164 |
| chr12 | 51662785 | 51665217 | E068 | 46203 |
| chr12 | 51610411 | 51610774 | E069 | -5808 |
| chr12 | 51610787 | 51613613 | E069 | -2969 |
| chr12 | 51631746 | 51633300 | E069 | 15164 |
| chr12 | 51662785 | 51665217 | E069 | 46203 |
| chr12 | 51610411 | 51610774 | E070 | -5808 |
| chr12 | 51610787 | 51613613 | E070 | -2969 |
| chr12 | 51631746 | 51633300 | E070 | 15164 |
| chr12 | 51610411 | 51610774 | E071 | -5808 |
| chr12 | 51610787 | 51613613 | E071 | -2969 |
| chr12 | 51631746 | 51633300 | E071 | 15164 |
| chr12 | 51662785 | 51665217 | E071 | 46203 |
| chr12 | 51610411 | 51610774 | E072 | -5808 |
| chr12 | 51610787 | 51613613 | E072 | -2969 |
| chr12 | 51631746 | 51633300 | E072 | 15164 |
| chr12 | 51662785 | 51665217 | E072 | 46203 |
| chr12 | 51610411 | 51610774 | E073 | -5808 |
| chr12 | 51610787 | 51613613 | E073 | -2969 |
| chr12 | 51631746 | 51633300 | E073 | 15164 |
| chr12 | 51662785 | 51665217 | E073 | 46203 |
| chr12 | 51610411 | 51610774 | E074 | -5808 |
| chr12 | 51610787 | 51613613 | E074 | -2969 |
| chr12 | 51631746 | 51633300 | E074 | 15164 |
| chr12 | 51662785 | 51665217 | E074 | 46203 |
| chr12 | 51631746 | 51633300 | E081 | 15164 |
| chr12 | 51610411 | 51610774 | E082 | -5808 |
| chr12 | 51610787 | 51613613 | E082 | -2969 |
| chr12 | 51631746 | 51633300 | E082 | 15164 |