rs10767971

Homo sapiens
T>C
None
Check p-value
SNV (Single Nucleotide Variation)
T==0355 (10631/29916,GnomAD)
T==0358 (10428/29118,TOPMED)
T==0333 (1666/5008,1000G)
T==0410 (1581/3854,ALSPAC)
T==0408 (1513/3708,TWINSUK)
chr11:32874118 (GRCh38.p7) (11p13)
AD
GWASdb2
2   publication(s)
See rs on genome
28 Enhancers around
17 Promoters around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 11NC_000011.10:g.32874118T>C
GRCh37.p13 chr 11NC_000011.9:g.32895664T>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.236C=0.764
1000GenomesAmericanSub694T=0.300C=0.700
1000GenomesEast AsianSub1008T=0.514C=0.486
1000GenomesEuropeSub1006T=0.394C=0.606
1000GenomesGlobalStudy-wide5008T=0.333C=0.667
1000GenomesSouth AsianSub978T=0.230C=0.770
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.410C=0.590
The Genome Aggregation DatabaseAfricanSub8706T=0.283C=0.717
The Genome Aggregation DatabaseAmericanSub834T=0.330C=0.670
The Genome Aggregation DatabaseEast AsianSub1618T=0.562C=0.438
The Genome Aggregation DatabaseEuropeSub18458T=0.370C=0.629
The Genome Aggregation DatabaseGlobalStudy-wide29916T=0.355C=0.644
The Genome Aggregation DatabaseOtherSub300T=0.480C=0.520
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.358C=0.641
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.408C=0.592
PMID Title Author Journal
20201924Genome-wide association study of alcohol dependence implicates a region on chromosome 11.Edenberg HJAlcohol Clin Exp Res
19772629Genomewide association study for onset age in Parkinson disease.Latourelle JCBMC Med Genet

P-Value

SNP ID p-value Traits Study
rs107679710.000483alcohol dependence20201924

eQTL of rs10767971 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs10767971 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr113291657432917056E06720910
chr113291711232917331E06721448
chr113292122732921296E06725563
chr113292133432921422E06725670
chr113292155532921605E06725891
chr113287291332873063E068-22601
chr113291657432917056E06820910
chr113291711232917331E06821448
chr113291734432917412E06821680
chr113287291332873063E071-22601
chr113291657432917056E07120910
chr113291711232917331E07121448
chr113291734432917412E07121680
chr113292122732921296E07225563
chr113292133432921422E07225670
chr113292155532921605E07225891
chr113292085932920926E07325195
chr113287291332873063E074-22601
chr113291657432917056E07420910
chr113291711232917331E07421448
chr113291734432917412E07421680
chr113292085932920926E07425195
chr113292093732921021E07425273
chr113292122732921296E07425563
chr113292133432921422E07425670
chr113292155532921605E07425891
chr113291734432917412E08121680
chr113291852732918586E08122863







Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr113285077032852678E067-42986
chr113291248632916542E06716822
chr113285077032852678E068-42986
chr113291248632916542E06816822
chr113285077032852678E069-42986
chr113291248632916542E06916822
chr113291248632916542E07016822
chr113285077032852678E071-42986
chr113291248632916542E07116822
chr113285077032852678E072-42986
chr113291248632916542E07216822
chr113285077032852678E073-42986
chr113291248632916542E07316822
chr113285077032852678E074-42986
chr113291248632916542E07416822
chr113291248632916542E08116822
chr113291248632916542E08216822