rs10808366

Homo sapiens
T>G
None
Check p-value
SNV (Single Nucleotide Variation)
G=0091 (2749/29948,GnomAD)
G=0090 (2643/29118,TOPMED)
G=0138 (692/5008,1000G)
G=0060 (231/3854,ALSPAC)
G=0048 (179/3708,TWINSUK)
chr8:100798419 (GRCh38.p7) (8q22.3)
AD
GWASdb2
1   publication(s)
See rs on genome
21 Enhancers around
0 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 8NC_000008.11:g.100798419T>G
GRCh37.p13 chr 8NC_000008.10:g.101810647T>G

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.889G=0.111
1000GenomesAmericanSub694T=0.810G=0.190
1000GenomesEast AsianSub1008T=0.711G=0.289
1000GenomesEuropeSub1006T=0.948G=0.052
1000GenomesGlobalStudy-wide5008T=0.862G=0.138
1000GenomesSouth AsianSub978T=0.930G=0.070
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.940G=0.060
The Genome Aggregation DatabaseAfricanSub8712T=0.883G=0.117
The Genome Aggregation DatabaseAmericanSub834T=0.810G=0.190
The Genome Aggregation DatabaseEast AsianSub1604T=0.688G=0.312
The Genome Aggregation DatabaseEuropeSub18496T=0.943G=0.056
The Genome Aggregation DatabaseGlobalStudy-wide29948T=0.908G=0.091
The Genome Aggregation DatabaseOtherSub302T=0.950G=0.050
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.909G=0.090
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.952G=0.048
PMID Title Author Journal
23743675A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks.Kapoor MHum Genet

P-Value

SNP ID p-value Traits Study
rs108083664.14E-05alcohol consumption23743675

eQTL of rs10808366 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs10808366 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr8101773554101775046E068-35601
chr8101847470101848214E06836823
chr8101762717101763214E071-47433
chr8101764400101764498E071-46149
chr8101764560101764751E071-45896
chr8101764770101764823E071-45824
chr8101803597101803661E072-6986
chr8101803758101804338E074-6309
chr8101804391101804510E074-6137
chr8101847470101848214E07436823
chr8101848259101848339E07437612
chr8101859230101859295E07448583
chr8101775773101775823E081-34824
chr8101775832101775882E081-34765
chr8101775951101776079E081-34568
chr8101803597101803661E081-6986
chr8101803758101804338E081-6309
chr8101804391101804510E081-6137
chr8101851627101851825E08140980
chr8101851845101851917E08141198
chr8101775334101775644E082-35003