SNP Detail Info-rs10879871

Organism: Homo sapiens

Alleles: T>G

Gene : Feature

None

p-value: Check p-value

Variation Type: SNV (Single Nucleotide Variation)

Frequency:

T==0434 (13006/29926,GnomAD)
T==0492 (14337/29118,TOPMED)
T==0497 (2489/5008,1000G)
T==0345 (1328/3854,ALSPAC)
T==0343 (1271/3708,TWINSUK)

Position: chr12:74986731 (GRCh38.p7) (12q21.1)

Phenotype: AD

Dataset:

GWASdb2

Publications: 1 publication(s)

Genomic View: See rs on genome

Enhancer: 0 Enhancer around

Promoter: 0 Promoter around

Sequence Name	Change(s)
GRCh38.p7 chr 12	NC_000012.12:g.74986731T>G
GRCh37.p13 chr 12	NC_000012.11:g.75380511T>G

Study	Population	Group	Sample #	Ref Allele	Alt Allele
1000Genomes	African	Sub	1322	T=0.710	G=0.290
1000Genomes	American	Sub	694	T=0.420	G=0.580
1000Genomes	East Asian	Sub	1008	T=0.319	G=0.681
1000Genomes	Europe	Sub	1006	T=0.394	G=0.606
1000Genomes	Global	Study-wide	5008	T=0.497	G=0.503
1000Genomes	South Asian	Sub	978	T=0.550	G=0.450
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	T=0.345	G=0.655
The Genome Aggregation Database	African	Sub	8696	T=0.633	G=0.367
The Genome Aggregation Database	American	Sub	834	T=0.480	G=0.520
The Genome Aggregation Database	East Asian	Sub	1620	T=0.316	G=0.684
The Genome Aggregation Database	Europe	Sub	18476	T=0.347	G=0.652
The Genome Aggregation Database	Global	Study-wide	29926	T=0.434	G=0.565
The Genome Aggregation Database	Other	Sub	300	T=0.530	G=0.470
Trans-Omics for Precision Medicine	Global	Study-wide	29118	T=0.492	G=0.507
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	T=0.343	G=0.657

rs10879871