Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 11 | NC_000011.10:g.116256087G>A |
GRCh37.p13 chr 11 | NC_000011.9:g.116126804G>A |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | G=0.652 | A=0.348 |
1000Genomes | American | Sub | 694 | G=0.510 | A=0.490 |
1000Genomes | East Asian | Sub | 1008 | G=0.481 | A=0.519 |
1000Genomes | Europe | Sub | 1006 | G=0.386 | A=0.614 |
1000Genomes | Global | Study-wide | 5008 | G=0.480 | A=0.520 |
1000Genomes | South Asian | Sub | 978 | G=0.320 | A=0.680 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | G=0.392 | A=0.608 |
The Genome Aggregation Database | African | Sub | 8674 | G=0.607 | A=0.393 |
The Genome Aggregation Database | American | Sub | 834 | G=0.560 | A=0.440 |
The Genome Aggregation Database | East Asian | Sub | 1616 | G=0.487 | A=0.513 |
The Genome Aggregation Database | Europe | Sub | 18460 | G=0.415 | A=0.584 |
The Genome Aggregation Database | Global | Study-wide | 29886 | G=0.479 | A=0.520 |
The Genome Aggregation Database | Other | Sub | 302 | G=0.410 | A=0.590 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | G=0.501 | A=0.498 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | G=0.395 | A=0.605 |
PMID | Title | Author | Journal |
---|---|---|---|
20201924 | Genome-wide association study of alcohol dependence implicates a region on chromosome 11. | Edenberg HJ | Alcohol Clin Exp Res |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs10891937 | 0.00016 | alcohol dependence(early age of onset) | 20201924 |
rs10891937 | 0.00086 | alcohol dependence | 20201924 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr11 | 116089825 | 116089984 | E067 | -36820 |
chr11 | 116095592 | 116095644 | E067 | -31160 |
chr11 | 116095694 | 116095765 | E067 | -31039 |
chr11 | 116095804 | 116096349 | E067 | -30455 |
chr11 | 116095592 | 116095644 | E068 | -31160 |
chr11 | 116095694 | 116095765 | E068 | -31039 |
chr11 | 116099906 | 116101440 | E068 | -25364 |
chr11 | 116127862 | 116128078 | E068 | 1058 |
chr11 | 116133891 | 116134128 | E068 | 7087 |
chr11 | 116089720 | 116089802 | E069 | -37002 |
chr11 | 116089825 | 116089984 | E069 | -36820 |
chr11 | 116090062 | 116090437 | E069 | -36367 |
chr11 | 116095189 | 116095526 | E069 | -31278 |
chr11 | 116095592 | 116095644 | E069 | -31160 |
chr11 | 116095694 | 116095765 | E069 | -31039 |
chr11 | 116146992 | 116148073 | E069 | 20188 |
chr11 | 116087692 | 116088108 | E070 | -38696 |
chr11 | 116090062 | 116090437 | E070 | -36367 |
chr11 | 116090459 | 116090536 | E070 | -36268 |
chr11 | 116094790 | 116094855 | E070 | -31949 |
chr11 | 116095037 | 116095119 | E070 | -31685 |
chr11 | 116095189 | 116095526 | E070 | -31278 |
chr11 | 116095592 | 116095644 | E070 | -31160 |
chr11 | 116095694 | 116095765 | E070 | -31039 |
chr11 | 116095804 | 116096349 | E070 | -30455 |
chr11 | 116096354 | 116096463 | E070 | -30341 |
chr11 | 116096588 | 116096789 | E070 | -30015 |
chr11 | 116099356 | 116099477 | E070 | -27327 |
chr11 | 116099519 | 116099573 | E070 | -27231 |
chr11 | 116099906 | 116101440 | E070 | -25364 |
chr11 | 116101508 | 116101564 | E070 | -25240 |
chr11 | 116101588 | 116101684 | E070 | -25120 |
chr11 | 116101846 | 116101933 | E070 | -24871 |
chr11 | 116102142 | 116102668 | E070 | -24136 |
chr11 | 116102787 | 116102841 | E070 | -23963 |
chr11 | 116103046 | 116103101 | E070 | -23703 |
chr11 | 116103133 | 116103547 | E070 | -23257 |
chr11 | 116103566 | 116103710 | E070 | -23094 |
chr11 | 116103799 | 116103986 | E070 | -22818 |
chr11 | 116104186 | 116104374 | E070 | -22430 |
chr11 | 116104419 | 116104679 | E070 | -22125 |
chr11 | 116113708 | 116113782 | E070 | -13022 |
chr11 | 116113863 | 116113913 | E070 | -12891 |
chr11 | 116113940 | 116113990 | E070 | -12814 |
chr11 | 116114823 | 116114863 | E070 | -11941 |
chr11 | 116114872 | 116114984 | E070 | -11820 |
chr11 | 116114994 | 116115094 | E070 | -11710 |
chr11 | 116115422 | 116115658 | E070 | -11146 |
chr11 | 116115669 | 116115940 | E070 | -10864 |
chr11 | 116120645 | 116120695 | E070 | -6109 |
chr11 | 116133279 | 116133345 | E070 | 6475 |
chr11 | 116133426 | 116133511 | E070 | 6622 |
chr11 | 116133516 | 116133566 | E070 | 6712 |
chr11 | 116133891 | 116134128 | E070 | 7087 |
chr11 | 116134195 | 116134902 | E070 | 7391 |
chr11 | 116134996 | 116135069 | E070 | 8192 |
chr11 | 116136393 | 116136443 | E070 | 9589 |
chr11 | 116136598 | 116136687 | E070 | 9794 |
chr11 | 116136712 | 116136759 | E070 | 9908 |
chr11 | 116137006 | 116137218 | E070 | 10202 |
chr11 | 116137366 | 116137446 | E070 | 10562 |
chr11 | 116137818 | 116137899 | E070 | 11014 |
chr11 | 116138000 | 116138126 | E070 | 11196 |
chr11 | 116143100 | 116143199 | E070 | 16296 |
chr11 | 116144276 | 116144347 | E070 | 17472 |
chr11 | 116144512 | 116144570 | E070 | 17708 |
chr11 | 116144870 | 116144920 | E070 | 18066 |
chr11 | 116145010 | 116145973 | E070 | 18206 |
chr11 | 116146041 | 116146091 | E070 | 19237 |
chr11 | 116146122 | 116146179 | E070 | 19318 |
chr11 | 116146455 | 116146643 | E070 | 19651 |
chr11 | 116146827 | 116146990 | E070 | 20023 |
chr11 | 116146992 | 116148073 | E070 | 20188 |
chr11 | 116148123 | 116148187 | E070 | 21319 |
chr11 | 116149494 | 116149683 | E070 | 22690 |
chr11 | 116149740 | 116149823 | E070 | 22936 |
chr11 | 116150195 | 116150728 | E070 | 23391 |
chr11 | 116150970 | 116151021 | E070 | 24166 |
chr11 | 116155376 | 116155466 | E070 | 28572 |
chr11 | 116155756 | 116156105 | E070 | 28952 |
chr11 | 116156163 | 116156293 | E070 | 29359 |
chr11 | 116171030 | 116171074 | E070 | 44226 |
chr11 | 116171148 | 116171273 | E070 | 44344 |
chr11 | 116171617 | 116171667 | E070 | 44813 |
chr11 | 116095037 | 116095119 | E071 | -31685 |
chr11 | 116095189 | 116095526 | E071 | -31278 |
chr11 | 116095592 | 116095644 | E071 | -31160 |
chr11 | 116095694 | 116095765 | E071 | -31039 |
chr11 | 116095804 | 116096349 | E071 | -30455 |
chr11 | 116095592 | 116095644 | E072 | -31160 |
chr11 | 116095694 | 116095765 | E072 | -31039 |
chr11 | 116095804 | 116096349 | E072 | -30455 |
chr11 | 116133891 | 116134128 | E072 | 7087 |
chr11 | 116089720 | 116089802 | E073 | -37002 |
chr11 | 116089825 | 116089984 | E073 | -36820 |
chr11 | 116090062 | 116090437 | E073 | -36367 |
chr11 | 116090459 | 116090536 | E073 | -36268 |
chr11 | 116094656 | 116094732 | E073 | -32072 |
chr11 | 116094790 | 116094855 | E073 | -31949 |
chr11 | 116095189 | 116095526 | E073 | -31278 |
chr11 | 116095592 | 116095644 | E073 | -31160 |
chr11 | 116095694 | 116095765 | E073 | -31039 |
chr11 | 116136712 | 116136759 | E073 | 9908 |
chr11 | 116146827 | 116146990 | E073 | 20023 |
chr11 | 116146992 | 116148073 | E073 | 20188 |
chr11 | 116078972 | 116079022 | E081 | -47782 |
chr11 | 116090062 | 116090437 | E081 | -36367 |
chr11 | 116090459 | 116090536 | E081 | -36268 |
chr11 | 116095189 | 116095526 | E081 | -31278 |
chr11 | 116095592 | 116095644 | E081 | -31160 |
chr11 | 116095694 | 116095765 | E081 | -31039 |
chr11 | 116095804 | 116096349 | E081 | -30455 |
chr11 | 116096354 | 116096463 | E081 | -30341 |
chr11 | 116096588 | 116096789 | E081 | -30015 |
chr11 | 116099906 | 116101440 | E081 | -25364 |
chr11 | 116101508 | 116101564 | E081 | -25240 |
chr11 | 116101588 | 116101684 | E081 | -25120 |
chr11 | 116101846 | 116101933 | E081 | -24871 |
chr11 | 116120645 | 116120695 | E081 | -6109 |
chr11 | 116133426 | 116133511 | E081 | 6622 |
chr11 | 116133516 | 116133566 | E081 | 6712 |
chr11 | 116133891 | 116134128 | E081 | 7087 |
chr11 | 116134195 | 116134902 | E081 | 7391 |
chr11 | 116134996 | 116135069 | E081 | 8192 |
chr11 | 116141106 | 116141156 | E081 | 14302 |
chr11 | 116141462 | 116141717 | E081 | 14658 |
chr11 | 116141981 | 116142083 | E081 | 15177 |
chr11 | 116142476 | 116142516 | E081 | 15672 |
chr11 | 116143100 | 116143199 | E081 | 16296 |
chr11 | 116144276 | 116144347 | E081 | 17472 |
chr11 | 116144512 | 116144570 | E081 | 17708 |
chr11 | 116144870 | 116144920 | E081 | 18066 |
chr11 | 116145010 | 116145973 | E081 | 18206 |
chr11 | 116146041 | 116146091 | E081 | 19237 |
chr11 | 116146122 | 116146179 | E081 | 19318 |
chr11 | 116146455 | 116146643 | E081 | 19651 |
chr11 | 116146827 | 116146990 | E081 | 20023 |
chr11 | 116146992 | 116148073 | E081 | 20188 |
chr11 | 116149494 | 116149683 | E081 | 22690 |
chr11 | 116149740 | 116149823 | E081 | 22936 |
chr11 | 116150195 | 116150728 | E081 | 23391 |
chr11 | 116150970 | 116151021 | E081 | 24166 |
chr11 | 116155376 | 116155466 | E081 | 28572 |
chr11 | 116155756 | 116156105 | E081 | 28952 |
chr11 | 116156163 | 116156293 | E081 | 29359 |
chr11 | 116156915 | 116156965 | E081 | 30111 |
chr11 | 116158328 | 116158609 | E081 | 31524 |
chr11 | 116158700 | 116158867 | E081 | 31896 |
chr11 | 116172408 | 116172503 | E081 | 45604 |
chr11 | 116173358 | 116173443 | E081 | 46554 |
chr11 | 116173500 | 116174072 | E081 | 46696 |
chr11 | 116090062 | 116090437 | E082 | -36367 |
chr11 | 116090459 | 116090536 | E082 | -36268 |
chr11 | 116095189 | 116095526 | E082 | -31278 |
chr11 | 116095592 | 116095644 | E082 | -31160 |
chr11 | 116095694 | 116095765 | E082 | -31039 |
chr11 | 116095804 | 116096349 | E082 | -30455 |
chr11 | 116096354 | 116096463 | E082 | -30341 |
chr11 | 116096588 | 116096789 | E082 | -30015 |
chr11 | 116099906 | 116101440 | E082 | -25364 |
chr11 | 116101508 | 116101564 | E082 | -25240 |
chr11 | 116101588 | 116101684 | E082 | -25120 |
chr11 | 116133891 | 116134128 | E082 | 7087 |
chr11 | 116134195 | 116134902 | E082 | 7391 |
chr11 | 116136598 | 116136687 | E082 | 9794 |
chr11 | 116136712 | 116136759 | E082 | 9908 |
chr11 | 116137006 | 116137218 | E082 | 10202 |
chr11 | 116137366 | 116137446 | E082 | 10562 |
chr11 | 116144512 | 116144570 | E082 | 17708 |
chr11 | 116144870 | 116144920 | E082 | 18066 |
chr11 | 116145010 | 116145973 | E082 | 18206 |
chr11 | 116146041 | 116146091 | E082 | 19237 |
chr11 | 116146122 | 116146179 | E082 | 19318 |
chr11 | 116155756 | 116156105 | E082 | 28952 |
chr11 | 116156163 | 116156293 | E082 | 29359 |
chr11 | 116156915 | 116156965 | E082 | 30111 |
chr11 | 116173358 | 116173443 | E082 | 46554 |
chr11 | 116173500 | 116174072 | E082 | 46696 |