Sequence Name | Change(s) |
---|---|
GRCh38.p7 chr 7 | NC_000007.14:g.107731890T>C |
GRCh37.p13 chr 7 | NC_000007.13:g.107372335T>C |
Study | Population | Group | Sample # | Ref Allele | Alt Allele |
---|---|---|---|---|---|
1000Genomes | African | Sub | 1322 | T=0.370 | C=0.630 |
1000Genomes | American | Sub | 694 | T=0.240 | C=0.760 |
1000Genomes | East Asian | Sub | 1008 | T=0.017 | C=0.983 |
1000Genomes | Europe | Sub | 1006 | T=0.304 | C=0.696 |
1000Genomes | Global | Study-wide | 5008 | T=0.223 | C=0.777 |
1000Genomes | South Asian | Sub | 978 | T=0.140 | C=0.860 |
The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | T=0.296 | C=0.704 |
The Genome Aggregation Database | African | Sub | 8712 | T=0.373 | C=0.627 |
The Genome Aggregation Database | American | Sub | 838 | T=0.180 | C=0.820 |
The Genome Aggregation Database | East Asian | Sub | 1620 | T=0.011 | C=0.989 |
The Genome Aggregation Database | Europe | Sub | 18474 | T=0.277 | C=0.722 |
The Genome Aggregation Database | Global | Study-wide | 29946 | T=0.288 | C=0.711 |
The Genome Aggregation Database | Other | Sub | 302 | T=0.300 | C=0.700 |
Trans-Omics for Precision Medicine | Global | Study-wide | 29118 | T=0.312 | C=0.687 |
UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | T=0.297 | C=0.703 |
PMID | Title | Author | Journal |
---|---|---|---|
23743675 | A meta-analysis of two genome-wide association studies to identify novel loci for maximum number of alcoholic drinks. | Kapoor M | Hum Genet |
SNP ID | p-value | Traits | Study |
---|---|---|---|
rs10953545 | 6.55E-05 | alcohol consumption | 23743675 |
Position (v37) | eGene | GeneID | Variant | p-value | TSS | Tissue | |
---|---|---|---|---|---|---|---|
There is no eQTL annotation for this SNP |
Probe ID | Position | Gene | beta | p-value | |||
---|---|---|---|---|---|---|---|
There is no meQTL annotation for this SNP |
There is no significant Hi-C chromatin interaction data for this SNP.
Chromosome | Start | End | Region | Distance ( -/+ : Up/Downstream ) |
---|---|---|---|---|
chr7 | 107333486 | 107333578 | E067 | -38757 |
chr7 | 107333824 | 107334105 | E067 | -38230 |
chr7 | 107334175 | 107334517 | E067 | -37818 |
chr7 | 107334625 | 107335182 | E067 | -37153 |
chr7 | 107335233 | 107335327 | E067 | -37008 |
chr7 | 107383023 | 107383099 | E067 | 10688 |
chr7 | 107386669 | 107386772 | E067 | 14334 |
chr7 | 107387624 | 107387709 | E067 | 15289 |
chr7 | 107387798 | 107387880 | E067 | 15463 |
chr7 | 107333486 | 107333578 | E068 | -38757 |
chr7 | 107333824 | 107334105 | E068 | -38230 |
chr7 | 107334175 | 107334517 | E068 | -37818 |
chr7 | 107334625 | 107335182 | E068 | -37153 |
chr7 | 107335233 | 107335327 | E068 | -37008 |
chr7 | 107341168 | 107341256 | E068 | -31079 |
chr7 | 107341276 | 107341497 | E068 | -30838 |
chr7 | 107382753 | 107382818 | E068 | 10418 |
chr7 | 107386669 | 107386772 | E068 | 14334 |
chr7 | 107387624 | 107387709 | E068 | 15289 |
chr7 | 107387798 | 107387880 | E068 | 15463 |
chr7 | 107387932 | 107387978 | E068 | 15597 |
chr7 | 107388350 | 107388400 | E068 | 16015 |
chr7 | 107333486 | 107333578 | E069 | -38757 |
chr7 | 107333824 | 107334105 | E069 | -38230 |
chr7 | 107334175 | 107334517 | E069 | -37818 |
chr7 | 107334625 | 107335182 | E069 | -37153 |
chr7 | 107335233 | 107335327 | E069 | -37008 |
chr7 | 107335529 | 107335618 | E069 | -36717 |
chr7 | 107337294 | 107337374 | E069 | -34961 |
chr7 | 107337495 | 107337545 | E069 | -34790 |
chr7 | 107383023 | 107383099 | E069 | 10688 |
chr7 | 107386669 | 107386772 | E069 | 14334 |
chr7 | 107387624 | 107387709 | E069 | 15289 |
chr7 | 107387798 | 107387880 | E069 | 15463 |
chr7 | 107387932 | 107387978 | E069 | 15597 |
chr7 | 107332948 | 107333294 | E070 | -39041 |
chr7 | 107333486 | 107333578 | E070 | -38757 |
chr7 | 107333824 | 107334105 | E070 | -38230 |
chr7 | 107334175 | 107334517 | E070 | -37818 |
chr7 | 107334625 | 107335182 | E070 | -37153 |
chr7 | 107335233 | 107335327 | E070 | -37008 |
chr7 | 107335529 | 107335618 | E070 | -36717 |
chr7 | 107335644 | 107335829 | E070 | -36506 |
chr7 | 107337495 | 107337545 | E070 | -34790 |
chr7 | 107337639 | 107338679 | E070 | -33656 |
chr7 | 107383023 | 107383099 | E070 | 10688 |
chr7 | 107386669 | 107386772 | E070 | 14334 |
chr7 | 107387798 | 107387880 | E070 | 15463 |
chr7 | 107387932 | 107387978 | E070 | 15597 |
chr7 | 107388350 | 107388400 | E070 | 16015 |
chr7 | 107332129 | 107332230 | E071 | -40105 |
chr7 | 107332267 | 107332442 | E071 | -39893 |
chr7 | 107332948 | 107333294 | E071 | -39041 |
chr7 | 107333486 | 107333578 | E071 | -38757 |
chr7 | 107333824 | 107334105 | E071 | -38230 |
chr7 | 107335233 | 107335327 | E071 | -37008 |
chr7 | 107337495 | 107337545 | E071 | -34790 |
chr7 | 107337639 | 107338679 | E071 | -33656 |
chr7 | 107383023 | 107383099 | E071 | 10688 |
chr7 | 107333824 | 107334105 | E072 | -38230 |
chr7 | 107334175 | 107334517 | E072 | -37818 |
chr7 | 107334625 | 107335182 | E072 | -37153 |
chr7 | 107337639 | 107338679 | E072 | -33656 |
chr7 | 107383023 | 107383099 | E072 | 10688 |
chr7 | 107386669 | 107386772 | E072 | 14334 |
chr7 | 107333824 | 107334105 | E073 | -38230 |
chr7 | 107334175 | 107334517 | E073 | -37818 |
chr7 | 107334625 | 107335182 | E073 | -37153 |
chr7 | 107335233 | 107335327 | E073 | -37008 |
chr7 | 107337639 | 107338679 | E073 | -33656 |
chr7 | 107333486 | 107333578 | E074 | -38757 |
chr7 | 107333824 | 107334105 | E074 | -38230 |
chr7 | 107334175 | 107334517 | E074 | -37818 |
chr7 | 107335233 | 107335327 | E074 | -37008 |
chr7 | 107333824 | 107334105 | E081 | -38230 |
chr7 | 107337639 | 107338679 | E081 | -33656 |
chr7 | 107338996 | 107339076 | E081 | -33259 |
chr7 | 107334175 | 107334517 | E082 | -37818 |
chr7 | 107334625 | 107335182 | E082 | -37153 |
chr7 | 107337294 | 107337374 | E082 | -34961 |
chr7 | 107337495 | 107337545 | E082 | -34790 |
chr7 | 107337639 | 107338679 | E082 | -33656 |
chr7 | 107386669 | 107386772 | E082 | 14334 |
chr7 | 107387798 | 107387880 | E082 | 15463 |
chr7 | 107387932 | 107387978 | E082 | 15597 |
chr7 | 107388350 | 107388400 | E082 | 16015 |
Chromosome | Start | End | Region | Distance(-/+:Up/Downstream) |
---|---|---|---|---|
chr7 | 107383118 | 107385525 | E067 | 10783 |
chr7 | 107383118 | 107385525 | E068 | 10783 |
chr7 | 107383118 | 107385525 | E069 | 10783 |
chr7 | 107383118 | 107385525 | E070 | 10783 |
chr7 | 107383118 | 107385525 | E071 | 10783 |
chr7 | 107383118 | 107385525 | E072 | 10783 |
chr7 | 107383118 | 107385525 | E073 | 10783 |
chr7 | 107383118 | 107385525 | E074 | 10783 |
chr7 | 107383118 | 107385525 | E081 | 10783 |
chr7 | 107383118 | 107385525 | E082 | 10783 |