rs11022710

Homo sapiens
T>C
None
Check p-value
SNV (Single Nucleotide Variation)
T==0352 (10534/29884,GnomAD)
T==0426 (12421/29118,TOPMED)
T==0369 (1848/5008,1000G)
T==0204 (785/3854,ALSPAC)
T==0194 (720/3708,TWINSUK)
chr11:13216162 (GRCh38.p7) (11p15.3)
AD
GWASdb2
1   publication(s)
See rs on genome
134 Enhancers around
1 Promoter around

Genomic Coordinates

Sequence Name Change(s)
GRCh38.p7 chr 11NC_000011.10:g.13216162T>C
GRCh37.p13 chr 11NC_000011.9:g.13237709T>C

Population Frequency

Study Population Group Sample # Ref Allele Alt Allele
1000GenomesAfricanSub1322T=0.729C=0.271
1000GenomesAmericanSub694T=0.330C=0.670
1000GenomesEast AsianSub1008T=0.186C=0.814
1000GenomesEuropeSub1006T=0.248C=0.752
1000GenomesGlobalStudy-wide5008T=0.369C=0.631
1000GenomesSouth AsianSub978T=0.230C=0.770
The Avon Longitudinal Study of Parents and ChildrenPARENT AND CHILD COHORTStudy-wide3854T=0.204C=0.796
The Genome Aggregation DatabaseAfricanSub8682T=0.641C=0.359
The Genome Aggregation DatabaseAmericanSub834T=0.360C=0.640
The Genome Aggregation DatabaseEast AsianSub1616T=0.157C=0.843
The Genome Aggregation DatabaseEuropeSub18450T=0.235C=0.765
The Genome Aggregation DatabaseGlobalStudy-wide29884T=0.352C=0.647
The Genome Aggregation DatabaseOtherSub302T=0.250C=0.750
Trans-Omics for Precision MedicineGlobalStudy-wide29118T=0.426C=0.573
UK 10K study - TwinsTWIN COHORTStudy-wide3708T=0.194C=0.806
PMID Title Author Journal
20201924Genome-wide association study of alcohol dependence implicates a region on chromosome 11.Edenberg HJAlcohol Clin Exp Res

P-Value

SNP ID p-value Traits Study
rs110227100.00073alcohol dependence20201924

eQTL of rs11022710 in Brain tissues (GTEx Analysis Release V7)

Position (v37) eGene GeneID Variant p-value TSS Tissue
There is no eQTL annotation for this SNP

meQTL of rs11022710 in Fetal Brain

Probe ID Position Gene beta p-value
There is no meQTL annotation for this SNP

Genomic View

Chromatin Interaction

There is no significant Hi-C chromatin interaction data for this SNP.

Enhancer Annotation (GRCh37.p13)

Chromosome Start End Region Distance ( -/+ : Up/Downstream )
chr111318960113189651E067-48058
chr111318972613190324E067-47385
chr111322875313228821E067-8888
chr111322883313228910E067-8799
chr111322892813230199E067-7510
chr111323021413230357E067-7352
chr111323039913230476E067-7233
chr111323057713230800E067-6909
chr111318932913189430E068-48279
chr111318960113189651E068-48058
chr111318972613190324E068-47385
chr111319034113190874E068-46835
chr111322696313227434E068-10275
chr111322746013227670E068-10039
chr111322771913227893E068-9816
chr111322792413228022E068-9687
chr111322802613228084E068-9625
chr111322851513228583E068-9126
chr111322875313228821E068-8888
chr111322883313228910E068-8799
chr111323057713230800E068-6909
chr111323085513230949E068-6760
chr111323113013231219E068-6490
chr111323128913231349E068-6360
chr111323139113231521E068-6188
chr111323745913238679E0680
chr111325923713259301E06821528
chr111325933413259711E06821625
chr111318960113189651E069-48058
chr111318972613190324E069-47385
chr111322621113226261E069-11448
chr111322687013226924E069-10785
chr111322696313227434E069-10275
chr111322746013227670E069-10039
chr111322771913227893E069-9816
chr111322851513228583E069-9126
chr111322875313228821E069-8888
chr111322883313228910E069-8799
chr111322892813230199E069-7510
chr111323021413230357E069-7352
chr111323039913230476E069-7233
chr111323057713230800E069-6909
chr111324380913244212E0696100
chr111324458613245011E0696877
chr111324517213245305E0697463
chr111325115713252322E06913448
chr111318960113189651E070-48058
chr111318972613190324E070-47385
chr111322687013226924E070-10785
chr111322696313227434E070-10275
chr111322746013227670E070-10039
chr111322771913227893E070-9816
chr111322792413228022E070-9687
chr111322892813230199E070-7510
chr111323021413230357E070-7352
chr111323039913230476E070-7233
chr111323057713230800E070-6909
chr111323085513230949E070-6760
chr111324181513241919E0704106
chr111324195613242003E0704247
chr111324458613245011E0706877
chr111324517213245305E0707463
chr111325019913250435E07012490
chr111325052313251129E07012814
chr111325115713252322E07013448
chr111318932913189430E071-48279
chr111318960113189651E071-48058
chr111318972613190324E071-47385
chr111322687013226924E071-10785
chr111322696313227434E071-10275
chr111322746013227670E071-10039
chr111322771913227893E071-9816
chr111322792413228022E071-9687
chr111322892813230199E071-7510
chr111323021413230357E071-7352
chr111323039913230476E071-7233
chr111323745913238679E0710
chr111325115713252322E07113448
chr111322696313227434E072-10275
chr111322746013227670E072-10039
chr111322771913227893E072-9816
chr111323021413230357E072-7352
chr111323039913230476E072-7233
chr111323057713230800E072-6909
chr111323181813231933E072-5776
chr111325115713252322E07213448
chr111318884413189081E073-48628
chr111318932913189430E073-48279
chr111318960113189651E073-48058
chr111318972613190324E073-47385
chr111322696313227434E073-10275
chr111322746013227670E073-10039
chr111322875313228821E073-8888
chr111322883313228910E073-8799
chr111322892813230199E073-7510
chr111323021413230357E073-7352
chr111323039913230476E073-7233
chr111318960113189651E074-48058
chr111318972613190324E074-47385
chr111322687013226924E074-10785
chr111322696313227434E074-10275
chr111322746013227670E074-10039
chr111322892813230199E074-7510
chr111323021413230357E074-7352
chr111323039913230476E074-7233
chr111323057713230800E074-6909
chr111322696313227434E081-10275
chr111322746013227670E081-10039
chr111322771913227893E081-9816
chr111322792413228022E081-9687
chr111322892813230199E081-7510
chr111323021413230357E081-7352
chr111323039913230476E081-7233
chr111323057713230800E081-6909
chr111324124413241294E0813535
chr111324380913244212E0816100
chr111324458613245011E0816877
chr111324517213245305E0817463
chr111325019913250435E08112490
chr111325052313251129E08112814
chr111325115713252322E08113448
chr111322696313227434E082-10275
chr111322746013227670E082-10039
chr111322771913227893E082-9816
chr111323021413230357E082-7352
chr111323039913230476E082-7233
chr111323057713230800E082-6909
chr111323171213231809E082-5900
chr111323181813231933E082-5776
chr111324380913244212E0826100
chr111324458613245011E0826877
chr111325052313251129E08212814
chr111325115713252322E08213448
chr111325629313256373E08218584










Promoter Annotation (GRCh37.p13)

Chromosome Start End Region Distance(-/+:Up/Downstream)
chr111325981513259900E06822106